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Table 2 Five most powerful SNPs on Chromosome 4. The five SNPs with the highest estimated power by PBAT screening on chromosome 4, and their corresponding p-values. Corresponding MERLIN LOD scores are also reported.

From: Comparison of linkage and association strategies for quantitative traits using the COGA dataset

SNP Allele Allele Frequency No. of Uninformative Families Power p-value (PBAT) LOD (MERLIN)
TSC0750487 2 0.33 110 0.96 0.0081 0.00
TSC0568024 1 0.33 111 0.95 0.0085 0.00
TSC0313521 2 0.11 117 0.94 0.1290 0.61
TSC0652507 1 0.34 115 0.94 0.9390 0.40
TSC0528071 1 0.30 115 0.93 0.0828 0.33