Skip to main content

Table 2 Result of family-based association test using FBAT

From: Identifying genetic variation affecting a complex trait in simulated data: a comparison of meta-analysis with pooled data analysis

SNPa p-meta p-all
Chromosome 1   
B01T0545 0.0138 0.1447
B01T0549 0.0341 0.0293
B01T0551 0.1946 0.0398
B01T0558 0.3482 0.0487
C01R0052 0.0316 0.3425
Chromosome 3   
B03T3052 0.0329 0.0043
B03T3056 <0.0001 <0.0001
B03T3057 <0.0001 <0.0001
B03T3058 <0.0001 <0.0001
C03R0281 <0.0001 <0.0001
B03T3066 0.0584 0.0021
Chromosome 5   
B05T4136 0.0006 <0.0001
B05T4143 0.0021 0.0171
B05T4145 0.5868 0.0409
B05T4146 0.0016 0.0065
Chromosome 9   
B09T8331 <0.0001 <0.0001
B09T8333 <0.0001 <0.0001
C09R0765 0.0449 0.0004
B09T8337 0.1199 0.0010
B09T8338 0.5018 0.0439
B09T8340 <0.0001 <0.0001
B09T8341 0.0074 <0.0001
C09R0766 0.4118 0.0373
  1. aSNPs are highlighted in bold if the p-values are less than 0.0006 in both combined analyses.