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Table 2 Result of family-based association test using FBAT

From: Identifying genetic variation affecting a complex trait in simulated data: a comparison of meta-analysis with pooled data analysis

SNPa

p-meta

p-all

Chromosome 1

  

B01T0545

0.0138

0.1447

B01T0549

0.0341

0.0293

B01T0551

0.1946

0.0398

B01T0558

0.3482

0.0487

C01R0052

0.0316

0.3425

Chromosome 3

  

B03T3052

0.0329

0.0043

B03T3056

<0.0001

<0.0001

B03T3057

<0.0001

<0.0001

B03T3058

<0.0001

<0.0001

C03R0281

<0.0001

<0.0001

B03T3066

0.0584

0.0021

Chromosome 5

  

B05T4136

0.0006

<0.0001

B05T4143

0.0021

0.0171

B05T4145

0.5868

0.0409

B05T4146

0.0016

0.0065

Chromosome 9

  

B09T8331

<0.0001

<0.0001

B09T8333

<0.0001

<0.0001

C09R0765

0.0449

0.0004

B09T8337

0.1199

0.0010

B09T8338

0.5018

0.0439

B09T8340

<0.0001

<0.0001

B09T8341

0.0074

<0.0001

C09R0766

0.4118

0.0373

  1. aSNPs are highlighted in bold if the p-values are less than 0.0006 in both combined analyses.
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BMC Genomic Data

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