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Table 1 Polymorphisms and observed haplotypes in the canine CLCN3 gene

From: Characterization of the canine CLCN3 gene and evaluation as candidate for late-onset NCL

Position1

Boxer2

Haplotype

Tibetan Terrier

PON

   

1

2

3

4

5

6

1

2

intron 1

16409

T

T

T

T

T

T

T

T

C

exon 2

2

A

A

A

A

A

A

G

A

A

intron 2

3

G

A

G

G

A

G

A

G

G

intron 5

10

G

A

A

A

A

A

A

A

A

intron 6

40

A

A

A

A

A

A

A

del

del

intron 6

2861

T

T

T

C

C

T

T

T

T

intron 6

3061

C

G

G

G

G

G

C

G

G

intron 6

3266

G

A

A

A

A

A

G

A

A

intron 6

3270

G

A

G

G

A

A

A

G

G

intron 6

3291

C

T

T

T

T

T

C

T

T

intron 7

38

G

G

A

G

G

G

G

G

G

intron 7

144

C

T

C

T

T

T

T

C

C

exon 9

6

A

G

G

G

G

G

G

G

G

  1. 1 Numbering refers to the position of the polymorphic nucleotide within the given exon or intron respectively.
  2. 2 Nucleotide refers to the publicly available dog genome sequence (AAEX01020012) from the boxer named Tasha.