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Table 1 Microsatellite markers selected for mapping the s locus.

From: Mapping of panda plumage color locus on the microsatellite linkage map of the Japanese quail

   Japanese quail Chicken
     Nucleotide similarity between Japanese quail and chicken (%)    
Locus Marker origin GenBank accession number TA
(°C)
5' flank 3' flank GenBank accession number References Map position in the draft sequence of GGA4 (bp)
ADL0255 Chicken (GGA4) AB038396 58 83 (71 nt) 100 (22 nt) G01675 [17] [19] 2,088,640 – 2,089,022
GUJ0026 Quail (CJA04) AB035836 60 91(87 nt) 90 (50 nt) - [26] [27] 10,067,404 – 10,067,587
ABR0544 Chicken (GGA4) AB220928 55 89(108 nt) 93(107 nt) AB186688 [18] 14,275,721 – 14,276,511
ADL0266 Chicken (GGA4) AB220927 50 93 (15 nt) 89(25 nt) G01686 [17] [18] 45,879,485 – 45,879,848
GUJ0074 Quail (CJA04) AB063142 59 93 (253 nt) 83 (24 nt) - [27] 49,116,133 – 49,116,445
  1. Nucleotide similarities of two original Japanese quail markers (GUJ0026 and GUJ0074) were calculated by BLAT search against the chicken draft genome sequence. Nucleotide similarities of three original chicken markers (ADL0255, ABR0544 and ADL0266) were calculated between the GenBank chicken sequence and quail sequence.