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Table 1 Number of SNPs selected by the different methods

From: Selection of SNP subsets for association studies in candidate genes: comparison of the power of different strategies to detect single disease susceptibility locus effects

  Number of SNPs selected
  Method I (Johnson et al.) Method II (Stram et al.) Method III (Cousin et al.) Method IV 0.5 (Carlson et al.) Method IV 0.8 (Carlson et al.)
C3AR1 – 21 SNPs - 8 21 10 11 11
CCR2 – 22 SNPs - 5 8 10 9 10
CEBPB – 10 SNPs - 5 5 4 5 6
CSF2 – 17 SNPs - 6 9 9 8 9
FCN3 – 14 SNPs - 8 10 10 10 10
FGL2 – 6 SNPs - 4 4 4 4 4
IFNG – 13 SNPs - 8 13 9 7 9
IL13 – 16 SNPs - 6 11 11 10 11
IL24 – 24 SNPs - 7 11 8 11 11
IL9 – 14 SNPs - 6 7 6 6 7
LTA – 19 SNPs - 8 11 9 8 12
LTB – 7 SNPs - 4 6 6 6 6
MC1R – 22 SNPs - 7 10 6 9 14
PLAU – 23 SNPs - 6 9 4 8 10
PROCR – 13 SNPs - 6 6 6 6 6
RELA – 12 SNPs - 5 6 7 7 7
SERPINC1 – 27 SNPs - 6 13 6 7 9
TNF – 12 SNPs - 4 5 3 4 6
TRADD – 11 SNPs - 5 8 8 7 7
VTN – 15 SNPs - 5 6 2 5 6