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Table 5

From: Separation of base allele and sampling term effects gives new insights in variance component QTL analysis

#y

Response vector

#X

Design matrix for fixed effects

#n_comp

Number of different random effects in the model (max.=2 in this version)

#conv_crit

Value that the change in loglikelihood should be less than

#n_maxiter

Maximum number of iterations

#lambda_start

Initial ratio of variance components

#delta

Minimum possible value of the variance component