From: Empirical vs Bayesian approach for estimating haplotypes from genotypes of unrelated individuals
Performances | Empirical Method | Bayesian Method | ||
---|---|---|---|---|
 | PL-EM | HPlus | PHASE | HAPLOTYPER* |
Similarity Index | Â | Â | Â | Â |
Mean | 0.989 | 0.990 | 0.986 | 0.991 |
Median | 1.0 | 1.0 | 1.0 | 1.0 |
Standard deviation | 0.029 | 0.024 | 0.040 | 0.024 |
Range | (0.733, 1.0) | (0.833, 1.0) | (0.292,1.0) | (0.733,1.0) |
Prediction Rate | Â | Â | Â | Â |
Mean | 0.989 | 0.990 | 0.990 | 0.991 |
Median | 1.0 | 1.0 | 1.0 | 1.0 |
Standard deviation | 0.029 | 0.025 | 0.040 | 0.025 |
Range | (0.733, 1.0) | (0.833, 1.0) | (0.283, 1.0) | (0.733, 1.0) |
Running Time (in second) | 98 | 20 | 9935 | 422 |