|  |  | qOLA(%) | Pyrosequencing (%) | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Breed or Cross a (Type of DNA) | Estimated Genotype b | No. of pigs | Expectedc | Observed d in qOLA_CNV | CVe | Expected | Observed in Pyro_CNV | CV | Expected | Observed in Pyro_Splice | CV |
D × L·LW (Blood DNA) | I1/i | 70 | 33.3 | 33.7 | 2.9 | 33.3 | 31.8 | 6.9 | 33.3 | 35.9 | 2.2 |
 | I2/i | 22 | 50 | 49.4 | 1.8 | 50 | 44.7 | 7.2 | 25 | 27.7 | 2.6 |
 | IP/i | 5 | 33.3 | 34.3 | na f | 33.3 | 29.7 | na | 0 | 0 | na |
 | i(I Be )/i | 3 | 0 | 0 | na | 0 | 1.8 | na | 0 | 0 | na |
LW (Hair follicle DNA) | I1/I1or I3/i(IBe) | 51 | 50 | 50.7 | 3.4 | 50 | 47.1 | 11.7 | 50 | 51.4 | 2.1 |
 | I1/I2 or I3/IP | 58 | 60 | 58.2 | 3.4 | 60 | 54.6 | 15.9 | 40 | 41.8 | 2.4 |
 | I1/IPor I2/i(IBe) | 12 | 50 | 51.0 | 3.1 | 50 | 47.4 | 7.3 | 25 | 27.9 | 3.8 |
 | I2/I2 | 24 | 66.7 | 65.7 | 3.5 | 66.7 | 61.1 | 11.3 | 33.3 | 34.3 | 6.2 |
 | I1/I3 | 2 | 60 | 57.3 | na | 60 | 58.3 | na | 60 | 61.2 | na |
 | I2/IP | 6 | 60 | 59.2 | na | 60 | 52.3 | na | 20 | 22.8 | na |
 | I2/I3 | 5 | 66.7 | 64.5 | na | 66.7 | 60.3 | na | 50 | 50.4 | na |
 | I3/I3 | 1 | 66.7 | 63.4 | na | 66.7 | 58.7 | na | 66.7 | 62.9 | na |