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Table 4 The averages of estimates over 1000 replicates for 300 two-offspring families by unrestricted method and the REM

From: Maximum likelihood estimates of two-locus recombination fractions under some natural inequality restrictions

  Parameters REM Unrestricted Method
Scenarioa θ AB θ BC θ AC θ ^ A B R MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGaf8hUdeNbaKaadaqhaaWcbaGaemyqaeKaemOqaieabaGaemOuaifaaaaa@3112@ θ ^ B C R MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGaf8hUdeNbaKaadaqhaaWcbaGaemOqaiKaem4qameabaGaemOuaifaaaaa@3116@ θ ^ A C R MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGaf8hUdeNbaKaadaqhaaWcbaGaemyqaeKaem4qameabaGaemOuaifaaaaa@3114@ θ ^ A B U MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGaf8hUdeNbaKaadaqhaaWcbaGaemyqaeKaemOqaieabaGaemyvaufaaaaa@3118@ θ ^ B C U MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGaf8hUdeNbaKaadaqhaaWcbaGaemOqaiKaem4qameabaGaemyvaufaaaaa@311C@ θ ^ A C U MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaacciGaf8hUdeNbaKaadaqhaaWcbaGaemyqaeKaem4qameabaGaemyvaufaaaaa@311A@
CC 0.05 0.05 0.06 0.0495 0.0497 0.0604 0.0499 0.0501 0.0597
    0.075 0.0498 0.0500 0.0751 0.0499 0.0500 0.0752
    0.09 0.0500 0.0500 0.0903 0.0496 0.0499 0.0903
CM 0.05 0.15 0.16 0.0502 0.1486 0.1607 0.0502 0.1494 0.1602
    0.175 0.0502 0.1495 0.1742 0.0502 0.1495 0.1745
    0.19 0.0497 0.1508 0.1898 0.0497 0.1509 0.1906
CL 0.05 0.35 0.36 0.0496 0.3531 0.3685 0.0496 0.3300 0.3711
    0.375 0.0502 0.3532 0.3777 0.0502 0.3287 0.3837
    0.39 0.0498 0.3534 0.3939 0.0499 0.3344 0.3990
MM 0.15 0.15 0.16 0.1487 0.1489 0.1643 0.1504 0.1507 0.1611
    0.225 0.1503 0.1500 0.2248 0.1503 0.1501 0.2252
    0.29 0.1497 0.1508 0.2887 0.1498 0.1509 0.2923
ML 0.15 0.35 0.36 0.1505 0.3494 0.3745 0.1505 0.3247 0.3737
    0.425 0.1505 0.3533 0.4274 0.1507 0.3254 0.4310
    0.49 0.1498 0.3481 0.4499 0.1503 0.3331 0.4535
LL 0.35 0.35 0.36 0.3443 0.3470 0.3601 0.3573 0.3312 0.3675
    0.425 0.3525 0.3517 0.4305 0.3582 0.3315 0.4272
    0.49 0.3531 0.3524 0.4554 0.3582 0.3255 0.4505
  1. aScenario: six combinations of linkage states of loci AB and loci BC (C: close linkage; M: moderate linkage; L: loose linkage).