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Table 3 Estimated LD between CAPN3 alleles in different breeds

From: Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cattle

SNP pair

Breed

r 2

P

c.53T>G c.1538+225G>T

BRM

0.366

<<0.00001

c.53T>G c.1538+225G>T

BEL

0.008

0.01513

c.53T>G c.1538+225G>T

SGT

0.062

<<0.00001

c.53T>G c.2443-103G>C

BRM

0.915

<<0.00001

c.53T>G c.2443-103G>C

BEL

0.853

<<0.00001

c.53T>G c.2443-103G>C

SGT

0.801

<<0.00001

c.1538+225G>T c.2443-103G>C

BRM

0.374

<<0.00001

c.1538+225G>T c.2443-103G>C

BEL

0.014

0.00317

c.1538+225G>T c.2443-103G>C

SGT

0.040

<<0.00001

  1. BRM, Brahman, BEL, Belmont Red, SGT, Santa Gertrudis