Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cattle

BMC Genomic Data

Table 6 Association between CAPN3 two-locus haplotypes and meat tenderness

Locus	Breed	p₂¹	V_r²	a³ kg	SE⁴	P_a⁵	α⁶gg	SE	P_α
Int1⁷	BRM	0.31	0.0118	0.117	0.060	0.054	0.137	0.058	0.018
Int1	BEL	0.79	0.0031	0.077	0.046	0.094	0.073	0.042	0.082
Int1	SGT	0.64	0.0150	-0.090	0.055	0.104	-0.119	0.053	0.026
Int2⁸	BRM	0.31	0.0149	0.183	0.060	0.003	0.169	0.056	0.003
Int2	BEL	0.79	0.0040	0.122	0.044	0.005	0.076	0.042	0.069
Int2	SGT	0.67	0.0136	-0.103	0.052	0.050	-0.125	0.050	0.012
Int3⁹	BRM	0.81	0.0092	-0.057	0.092	0.540	-0.260	0.168	0.122
Int3	BEL	0.94	0.0020	0.064	0.060	0.288	0.110	0.125	0.381
Int3	SGT	0.91	0.0016	-0.001	0.081	0.992	-0.107	0.175	0.542

¹Frequency of common haplotype, ² proportion of the residual variance explained by the common haplotype, ³ additive effect, ⁴ standard error of the additive effect, ⁵ P value of the additive effect, ⁶ haplotype substitution effect, ⁷ Int1 haplotype between CAPN3:c.53T>G and CAPN3:c.1538+225G>T, ⁸ Int2 haplotype between CAPN3:c.1538+225G>T and CAPN3:c.2443-103G>C, ⁹ Int3 haplotype between CAPN3:c.53T>G and CAPN3:c.2443-103G>C, ¹⁰ BRM Brahman, ¹¹ BEL Belmont Red, ¹² SGT Santa Gertrudis

ISSN: 2730-6844