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Table 6 Association between CAPN3 two-locus haplotypes and meat tenderness

From: Variation at the Calpain 3 gene is associated with meat tenderness in zebu and composite breeds of cattle

Locus Breed p21 Vr2 a3 kg SE4 P a 5 α6gg SE Pα
Int17 BRM 0.31 0.0118 0.117 0.060 0.054 0.137 0.058 0.018
Int1 BEL 0.79 0.0031 0.077 0.046 0.094 0.073 0.042 0.082
Int1 SGT 0.64 0.0150 -0.090 0.055 0.104 -0.119 0.053 0.026
Int28 BRM 0.31 0.0149 0.183 0.060 0.003 0.169 0.056 0.003
Int2 BEL 0.79 0.0040 0.122 0.044 0.005 0.076 0.042 0.069
Int2 SGT 0.67 0.0136 -0.103 0.052 0.050 -0.125 0.050 0.012
Int39 BRM 0.81 0.0092 -0.057 0.092 0.540 -0.260 0.168 0.122
Int3 BEL 0.94 0.0020 0.064 0.060 0.288 0.110 0.125 0.381
Int3 SGT 0.91 0.0016 -0.001 0.081 0.992 -0.107 0.175 0.542
  1. 1Frequency of common haplotype, 2 proportion of the residual variance explained by the common haplotype, 3 additive effect, 4 standard error of the additive effect, 5 P value of the additive effect, 6 haplotype substitution effect, 7 Int1 haplotype between CAPN3:c.53T>G and CAPN3:c.1538+225G>T, 8 Int2 haplotype between CAPN3:c.1538+225G>T and CAPN3:c.2443-103G>C, 9 Int3 haplotype between CAPN3:c.53T>G and CAPN3:c.2443-103G>C, 10 BRM Brahman, 11 BEL Belmont Red, 12 SGT Santa Gertrudis