SSR loci | Locus, Species, & Most related sequence (Genomic DNA/EST) | Query coverage (%) | Identity (%) | E-value* |
---|---|---|---|---|
DM21 | DQ645744, Phytophthora ramorum (Sudden oak death agent – Fungi), transposon GypsyPr-2 reverse transcriptase gene – Genomic DNA | 26 | 96 | 3e–20 |
DM28 | AF312890, Phytophthora cinnamomi SSR sequence – Genomic DNA | 45 | 90 | 4e–36 |
DM53 | DQ645744.1 – Phytopthora ramorum transposon GypsyPr-2 reverse transcriptase gene | 96 | 78 | 4e–70 |
 | AY830104, (GypsyPi-3a), AY830105 (GypsyPi-3b) Phytophthora infestans – retrotransposon | 93 | 96 | 3e–14 |
 | AF490339, Phytophthora infestans – Gypsy like retrotransposon, | 87 | 90 | 2e–09 |
 | DQ645742, Phytophthora sojae transposon GypsyPs-1A reverse transcriptase gene | 78 | 90 | 4e–07 |
DM55 | AY564217, Phytophthora ipomoeae | 54 | 90 | 6e–32 |
 | EU427470.1 – P. ramorum | 52 | 89 | 3e–30 |
 | AY564219 – P. andina, AY564218-P. phaseoli, AY564213 to AY564216 – P. mirabilis, AY564209 to AY003911 – P. infestans &DQ832717 and AY564221- Phytophthora sojae | 54 | 89 | 3e–30 |
 | - mitochondrion DNA |  |  |  |
 | ES287433 and ES286374Phytophthora brassicae | 54 54 | 88 88 | 2e–30 2e–29 |
 | CV935202Phytophthora infestans (potato late blight) | 54 | 86 | 1e–26 |
 | EL774547, EL777768, EL775494, EL779446, EL781147 and EL775427Pythium ultimum |  |  |  |
 | - ESTs, |  |  |  |