From: SNP discovery in swine by reduced representation and high throughput pyrosequencing
Library1 | Restriction Enzyme | Site | SINEs2 | LINEs | LTR | DNA | Total | Centromeric Repeats3 |
---|---|---|---|---|---|---|---|---|
GSS | Sheared | random | 11.30 | 16.14 | 2.80 | 1.51 | 31.75 | 0.00 |
pRRL1 | Alu I | AG|CT | 10.21 | 15.63 | 2.46 | 3.16 | 31.46 | 0.00 |
pRRL2 | Hae III | GG|CC | 13.19 | 11.33 | 3.11 | 1.79 | 29.42 | 0.00 |
pRRL3 | Bst U I | CG|CG | 1.98 | 0.40 | 0.03 | 0.42 | 2.83 | 23.83 |
pRRL4 | Dra I | TTT|AAA | 32.04 | 4.85 | 1.67 | 1.09 | 39.65 | 0.00 |
pRRL5 | Pvu II | CAG|CTG | 20.99 | 4.91 | 1.71 | 1.25 | 28.86 | 6.18 |