Table 5 Information on which genes that were amplified together with GenBank accession numbers and position in the chicken genome (from the UCSC Genome Browser).
Gene | Gallus gallus gene name | Accession number | Position in chicken genome (chromosome: nucleotide pos.) | Exon | Exon length (base pairs) |
|---|---|---|---|---|---|
AKR | homeodomain protein AKR | U25353 | chr2:103.921.346-103.921.912 | 2 | 567 |
APOA | apolipoprotein A-I | M17961 | chr24:5.237.113-5.237.710 | 2 | 598 |
BCL-2 | bcl-2 | D11382 | chr2:69.060.949-69.061.501 | 1 | 553 |
BCL-X | bcl-x | Z23110 | chr20:9.982.309-9.982.859 | one exon | 551 |
BRIP1 | BRCA1 interacting protein C-terminal helicase 1 | NM_001033058 | chr19:7.487.075-7.487.928 | 19 | 854 |
CAAX | phosphatase 1 regulatory (inhibitor) subunit 16B | NM_001030851 | chr20:3.798.908-3.799.425 | 9 | 518 |
CXCR4 | chemokine (C-X-C motif) receptor 4 | NM_204617 | chr7:32.377.230-32.378.282 | one exon | 1053 |
EPN2 | epsin 2 | NM_001012788 | chr14:5.218.405-5.218.997 | 1 | 593 |
KELCH | similar to kelch-like 10 | XM_418155 | chr27:4.334.591-4.335.186 | 3 | 596 |
LEPR | leptin receptor | NM_204323 | chr8:29.155.374-29.156.177 | 18 | 804 |
MBL | mannan-binding lectin associated serine protease 3 | AY567829 | chr9:15.984.978-15.985.841 | 10 | 864 |
MICRO | microfibrillar-associated protein 3 (MFAP3) | NM_001012784 | chr13:12.338.307-12.339.000 | 2 | 694 |
NGF | nerve growth factor | XM_418016 | chr26:3.859.235-3.859.771 | one exon | 537 |
PKP4 | plakophilin 4 | NM_001006529 | chr7:38.046.479-38.047.037 | 6 | 559 |
PPARG | peroxisome proliferative activated receptor gamma | NM_001001460 | chr12:5.081.300-5.081.735 | 5 | 436 |
TAR | TAR DNA binding protein | NM_001030878 | chr21:4.069.862-4.070.391 | 1 | 530 |
TRANS | UbiA prenyl-transferase domain containing 1 | NM_001030879 | chr21:4.196.588*-4.197.005 | 1 | 502 |
YTH | YTH domain family member 1 | NM_001012833 | chr20:8.697.322-8.698.208 | 4 | 887 |