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Table 5 Information on which genes that were amplified together with GenBank accession numbers and position in the chicken genome (from the UCSC Genome Browser).

From: A multilocus assay reveals high nucleotide diversity and limited differentiation among Scandinavian willow grouse (Lagopus lagopus)

Gene Gallus gallus gene name Accession number Position in chicken genome (chromosome: nucleotide pos.) Exon Exon length (base pairs)
AKR homeodomain protein AKR U25353 chr2:103.921.346-103.921.912 2 567
APOA apolipoprotein A-I M17961 chr24:5.237.113-5.237.710 2 598
BCL-2 bcl-2 D11382 chr2:69.060.949-69.061.501 1 553
BCL-X bcl-x Z23110 chr20:9.982.309-9.982.859 one exon 551
BRIP1 BRCA1 interacting protein C-terminal helicase 1 NM_001033058 chr19:7.487.075-7.487.928 19 854
CAAX phosphatase 1 regulatory (inhibitor) subunit 16B NM_001030851 chr20:3.798.908-3.799.425 9 518
CXCR4 chemokine (C-X-C motif) receptor 4 NM_204617 chr7:32.377.230-32.378.282 one exon 1053
EPN2 epsin 2 NM_001012788 chr14:5.218.405-5.218.997 1 593
KELCH similar to kelch-like 10 XM_418155 chr27:4.334.591-4.335.186 3 596
LEPR leptin receptor NM_204323 chr8:29.155.374-29.156.177 18 804
MBL mannan-binding lectin associated serine protease 3 AY567829 chr9:15.984.978-15.985.841 10 864
MICRO microfibrillar-associated protein 3 (MFAP3) NM_001012784 chr13:12.338.307-12.339.000 2 694
NGF nerve growth factor XM_418016 chr26:3.859.235-3.859.771 one exon 537
PKP4 plakophilin 4 NM_001006529 chr7:38.046.479-38.047.037 6 559
PPARG peroxisome proliferative activated receptor gamma NM_001001460 chr12:5.081.300-5.081.735 5 436
TAR TAR DNA binding protein NM_001030878 chr21:4.069.862-4.070.391 1 530
TRANS UbiA prenyl-transferase domain containing 1 NM_001030879 chr21:4.196.588*-4.197.005 1 502
YTH YTH domain family member 1 NM_001012833 chr20:8.697.322-8.698.208 4 887
  1. *The first 84 nucleotides were denoted as N's in the genome sequence