BMC Genomic Data

Table 4 Results of two selection tests for HTR1A and HTR1B

From: Patterns of genetic variation and the role of selection in HTR1A and HTR1B in macaques (Macaca)

HTR1A ^a,d
ω ^b						HKA^c
	Mul	Fas	Fus	Nem	Syl		Mul	Fas	Fus	Nem	Syl
Mul	-	0.032	0.040	0.015	0.013	Mul	-	0.107	0.939	0.008	0.108
Fas	0.242	-	0.038	0.195	0.115	Fas	13.93	-	0.269	0.210	0.676
Fus	0.046	0.252	-	0.020	0.017	Fus	3.39	10.72	-	0.033	0.512
Nem	0.152	0.423	0.162	-	0.035	Nem	22.15	10.23	18.89	-	0.449
Syl	0.121	0.269	0.129	0.043	-	Syl	14.82	5.84	6.93	6.22	-
*HTR1A* (outlier removed) ^a,d
ω ^b						HKA^c
	Mul	Fas	Fus	Nem	Syl		Mul	Fas	Fus	Nem	Syl
Mul	-	0.033	0.038	0.013	0.013	Mul	-	0.004	0.939	0.008	0.108
Fas	0.253	-	0.037	0.229	0.150	Fas	23.04	-	0.008	0.014	0.115
Fus	0.046	0.263	-	0.014	0.014	Fus	3.39	22.69	-	0.033	0.512
Nem	0.152	0.460	0.162	-	0.045	Nem	22.15	19.06	18.89	-	0.449
Syl	0.121	0.296	0.129	0.043	-	Syl	14.82	13.84	6.93	6.22	-
*HTR1B* ^a,d
ω ^b						HKA^c
	Mul	Fas	Fus	Nem	Syl		Mul	Fas	Fus	Nem	Syl
Mul	-	0.028	0.032	0.035	0.017	Mul	-	0.968	0.804	0.763	0.072
Fas	0.000	-	0.082	0.027	0.061	Fas	1.75	-	0.992	0.201	0.250
Fus	0.128	0.180	-	0.065	0.043	Fus	5.25	2.21	-	0.286	0.346
Nem	0.039	0.076	0.189	-	0.047	Nem	4.73	7.58	9.86	-	0.245
Syl	0.000	0.000	0.113	0.031	-	Syl	14.53	10.41	8.78	9.34	-

^aSee Table 1 for list of species.
^bNumbers in the lower left diagonal are the ratio of nonsynonymous to synonymous substitutions calculated between species and numbers in the upper right are their respective p-values.
^cLower left diagonal shows the sum of deviations calculated in the HKA program and the upper right shows their respective p-values.
^dNumbers bolded have a p <0.05.

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