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Table 1 PIC and gene diversity as revealed by 580 SNPs selected compared to their entire counterparts

From: Genetic diversity among INERA maize inbred lines with single nucleotide polymorphism (SNP) markers and their relationship with CIMMYT, IITA, and temperate lines

 

MAF

Gene diversity

Heterozygosity

PIC

1057 SNPs

Temperate

0.256

0.302

0.008

0.268

IITA

0.202

0.252

0.038

0.218

CIMMYT

0.223

0.278

0.039

0.238

INERA

0.211

0.282

0.048

0.232

Subset A

0.199

0.263

0.044

0.219

Subset B

0.205

0.263

0.055

0.222

580 SNPs

Temperate

0.306

0.348

0.01

0.305

IITA

0.287

0.348

0.053

0.295

CIMMYT

0.314

0.372

0.054

0.311

INERA

0.321

0.408

0.071

0.326

Subset A

0.305

0.383

0.067

0.312

Subset B

0.302

0.37

0.079

0.307