Genetic diversity analysis in a set of Caricaceae accessions using resistance gene analogues

BMC Genomic Data

Table 3 Minimum and maximum molecular weight, total number of alleles, rare alleles, null alleles and PIC values for the primers which gave amplification product

Marker	Gene	Protein	Min MW in bp	Max MW in bp	Number of alleles				Rare alleles	Null alleles	PIC values
Marker	Gene	Protein	Min MW in bp	Max MW in bp	Total	V&J	FA	IA	Rare alleles	Null alleles	Total	V&J	FA	IA
BDTG11	xa5	TF II A	138.77	250.14	10	3	4	9	0	0	0.846	0.449	0.775	0.959
BDTG12	”	”	115	1046	10	5	4	7	4	0	0.801	0.877	0.633	0.909
BDTG13	Xa26	RECP KINASE	108	182.99	6	2	2	6	1	1	0.611	0.469	0.408	0.882
BDTG14	”	”	141.28	252.08	10	7	4	10	2	2	0.852	0.939	0.816	0.992
BDTG17	”	”	98	269.81	8	3	5	5	1	1	0.764	0.612	0.878	0.919
BDTG19	Xa27	”	173.88	288.77	10	3	5	10	0	0	0.829	0.633	0.878	0.977
BDTG21	Xa21	LRR	98	107.70	4	2	3	4	0	0	0.661	0.245	0.633	0.805
BDTG22	”	”	170	590	8	4	1	7	0	1	0.669	0.775	0.878	0.977
BDTG23	”	”	104.27	210.39	8	4	4	8	0	1	0.851	0.714	0.939	0.974
BDTG24	”	CHARGED	176	387.20	6	3	2	5	0	1	0.617	0.714	0.959	0.971
BDTG25	”	KINASE	88.940	197.13	10	5	5	4	4	1	0.728	0.245	0.816	0.992
BDTG30	Xa1(A1)	”	210.11	391.46	9	4	5	8	0	1	0.815	0.775	0.249	0.894
BDTG31	”	”	110	650	10	3	2	10	0	0	0.796	0.939	0.775	0.528
BDTG34	”	KINASE	325.66	373.31	6	2	4	5	0	2	0.645	0.816	0.959	0.992
Total					115	50	50	102	12	11	10.485	9.202	10.59	12.77
Average					8.21	3.57	3.57	7.29	0.86	0.79	0.75	0.66	0.76	0.91

MinMW – Minimum molecular weight of the alleles in that locus, Max MW – Maximum molecular weight of the alleles in that locus, V& J – accessions of Vasconcellea and Jacaratia, FA – foreign Carica papaya accessions, IA - Indian Carica papaya accessions.

ISSN: 2730-6844