Alleles b | Genotype counts (11/12/22) | Minor allele (1) freq. | Allelic test d | ||||||
---|---|---|---|---|---|---|---|---|---|
SNP rs a | 1 | 2 | Cases | Controls | Cases | Controls | OR (95% CI) c | P asym | P emp |
rs3808850 (S1) | T | A | 10/53/65 | 66/230/174 | 0.2852 | 0.3851 | 0.61 (0.45-0.84) | 0.0022 | 0.0213 |
rs7849191 (S2) | T | C | 8/40/80 | 26/233/170 | 0.2188 | 0.3904 | 0.43 (0.30-0.60) | 6.35 × 10−7 | 4.00 × 10−5 |
rs7046736 (S3) | A | C | 40/69/19 | 65/225/180 | 0.5820 | 0.3777 | 2.53 (1.85-3.46) | 5.92 × 10−9 | 2.00 × 10−5 |
rs2149555 (S4) | T | C | 20/85/23 | 41/194/235 | 0.4883 | 0.2936 | 2.51 (1.82-3.48) | 2.01 × 10−8 | 2.00 × 10−5 |
rs1536798 (S5) | A | C | 28/57/43 | 59/228/183 | 0.4414 | 0.3681 | 1.30 (0.97-1.74) | 0.0765 | 0.4500 |
rs10815148 (S6) | A | T | 9/59/60 | 20/167/283 | 0.3008 | 0.2202 | 1.60 (1.15-2.23) | 0.0057 | 0.0509 |
rs2149556 (S7) | C | T | 8/63/57 | 86/245/139 | 0.3086 | 0.4436 | 0.51 (0.37-0.71) | 5.23 × 10−5 | 0.0005 |
rs12342421 (S8) | C | G | 52/54/22 | 43/197/230 | 0.6172 | 0.3011 | 3.55 (2.59-4.87) | 3.76 × 10−15 | 2.00 × 10−5 |
rs10974944 (S9) | G | C | 29/76/23 | 40/198/232 | 0.5234 | 0.2957 | 2.87 (2.08-3.96) | 1.50 × 10−10 | 2.00 × 10−5 |
rs10119004 (S10) | G | A | 10/71/47 | 121/248/101 | 0.3555 | 0.5213 | 0.46 (0.33-0.63) | 1.65 × 10−6 | 4.00 × 10−5 |
rs10974947 (S11) | A | G | 1/31/96 | 15/129/326 | 0.1289 | 0.1691 | 0.73 (0.48-1.11) | 0.1414 | 0.6676 |
rs12343867 (S12) | C | T | 22/80/23 | 39/186/245 | 0.4844 | 0.2809 | 2.60 (1.89-3.58) | 3.80 × 10−9 | 2.00 × 10−5 |
rs12340895 (S13) | G | C | 40/65/23 | 41/200/229 | 0.5664 | 0.3000 | 3.27 (2.37-4.51) | 4.68 × 10−13 | 2.00 × 10−5 |
rs12343065 (S14) | T | C | 28/77/23 | 41/201/228 | 0.5195 | 0.3011 | 2.80 (2.03-3.87) | 3.80 × 10−10 | 2.00 × 10−5 |
rs7857730 (S15) | G | T | 10/61/57 | 89/245/136 | 0.3164 | 0.4500 | 0.53 (0.38-0.73) | 0.0001 | 0.0012 |
rs3824432 (S16) | A | G | 1/37/90 | 26/148/296 | 0.1523 | 0.2128 | 0.67 (0.45-0.98) | 0.0382 | 0.2711 |
rs7847294 (S17) | A | C | 2/55/71 | 63/240/167 | 0.2305 | 0.3894 | 0.39 (0.27-0.56) | 3.74 × 10−7 | 2.00 × 10−5 |
rs3780378 (S18) | C | T | 8/58/62 | 84/239/147 | 0.2891 | 0.4330 | 0.49 (0.36-0.68) | 2.25 × 10−5 | 0.0002 |
rs10815162 (S19) | C | G | 2/43/83 | 40/182/248 | 0.1836 | 0.2787 | 0.59 (0.41-0.84) | 0.0037 | 0.0336 |