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Table 5 Descriptive statistics (based on similarities)

From: The effect of rare alleles on estimated genomic relationships from whole genome sequence data

 

Min

Mean

Max

Var

First degree relationships

    

A ped

0.503

0.548

0.663

0.0014

G SNP5+

0.815

0.876

0.974

0.0011

G SNP1+

0.891

0.949

1.040

0.0010

G SNP1_5

1.686

1.851

1.939

0.0026

G WGS5+

0.957

1.008

1.080

0.0006

G WGS1+

1.165

1.209

1.265

0.0005

G WGS1_5

1.719

1.822

1.876

0.0013

Second degree relationships

    

A ped

0.250

0.302

0.407

0.0013

G SNP5+

0.617

0.693

0.847

0.0021

G SNP1+

0.705

0.778

0.921

0.0019

G SNP1_5

1.622

1.830

1.910

0.0028

G WGS5+

0.786

0.864

1.009

0.0013

G WGS1+

1.034

1.096

1.207

0.0009

G WGS1_5

1.661

1.807

1.859

0.0016

Less-related

    

A ped

0.000

0.056

0.245

0.0019

G SNP5+

0.405

0.502

0.746

0.0017

G SNP1+

0.501

0.597

0.829

0.0017

G SNP1_5

1.477

1.773

1.925

0.0040

G WGS5+

0.634

0.715

0.911

0.0010

G WGS1+

0.889

0.976

1.132

0.0009

G WGS1_5

1.576

1.771

1.868

0.0017

Inbreeding coefficients

    

A ped

0.000

0.027

0.163

0.0009

G SNP5+

0.003

0.251

0.347

0.0015

G SNP1+

0.059

0.298

0.390

0.0014

G SNP1_5

0.706

0.886

0.974

0.0020

G WGS5+

0.163

0.342

0.417

0.0010

G WGS1+

0.321

0.473

0.537

0.0007

G WGS1_5

0.764

0.873

0.930

0.0009