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Table 6 Haplotype models for parents Ps-354 and Pr-355 at the Sen1/RSe-XIa locus

From: Genomic architecture of potato resistance to Synchytrium endobioticum disentangled using SSR markers and the 8.3k SolCAP SNP genotyping array

 

Pr-355

Ps-354

Locus

H1

H4

H5

H5

H2

H3

H4

H4

Solcap_c1_4319/4322

AT↑ a

GC

GC

GC

AT↑

GC

GC

GC

St_At5g16710_snp1/3/6

AAT↑

TCA

AAT↑

AAT↑

AAT↑

AAT↑

TCA

TCA

St_At5g16710_snp4

G

G

G

G

G

C↑

G

G

Y1delATT

1↑

0

0

0

0

0

0

0

GP259_snp7

G↑

A

A

A

G↑

A

A

A

GP259_snp16/17

AC

AC

AC

AC

AC

GA↑

AC

AC

  1. aThe allele linked with greater resistance is indicated by ↑.