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Table 3 Analysis of molecular variance (AMOVA) of the Siberian roe deer populations based on various geographic/genetic groupings (four geographic regions, three genetic clusters, and two geographic regions)

From: Genetic diversity and genetic structure of the Siberian roe deer (Capreolus pygargus) populations from Asia

A

Source of variation

df

SS

MS

Est. Var.

%

F-Statistics

Value

P-Value

Among regions

3

203.555

67.852

0.615

15

F RT

0.148

0.001

Among pop

6

50.962

8.494

0.142

3

F SR

0.040

0.001

Among individuals

179

733.874

4.100

0.710

17

F ST

0.182

0.001

Within individuals

189

506.500

2.680

2.680

65

F IS

0.209

0.001

Total

377

1494.892

 

4.147

100

F IT

0.354

0.001

B

Source of variation

df

SS

MS

Est. Var.

%

F-Statistics

Value

P-Value

Among regions

2

192.296

96.148

0.853

20

F RT

0.200

0.001

Among pop

5

33.272

6.654

0.077

2

F SR

0.022

0.001

Among individuals

158

627.752

3.973

0.640

15

F ST

0.218

0.001

Within individuals

166

447.000

2.693

2.693

63

F IS

0.192

0.001

Total

331

1300.319

 

4.263

100

F IT

0.368

0.001

C

Source of variation

df

SS

MS

Est. Var.

%

F-Statistics

Value

P-Value

Among regions

1

53.813

53.813

0.370

9

F RT

0.093

0.001

Among pop

5

33.272

6.654

0.071

2

F SR

0.020

0.001

Among individuals

126

524.919

4.166

0.645

16

F ST

0.111

0.001

Within individuals

133

382.500

2.876

2.876

73

F IS

0.183

0.001

Total

265

994.504

 

3.962

100

F IT

0.274

0.001

  1. A: Four regions: Jeju Island (SKJ), East region (SKM, RPR), Central region (RYA, RSO, MGN) and West region (RAL, RNO, RUL, RKU). B: Three genetic clusters with two admixed populations (RYA and RAL) excluded: Jeju Island (SKJ), Eastern region (SKM, RPR, RSO, MGN) and Western region (RNO, RUL, RKU). C: Two geographic regions with SKJ and two admixed populations (RYA and RAL) excluded: Eastern region (SKM, RPR, RSO, MGN) and Western region (RNO, RUL, RKU)
  2. df: degrees of freedom; SS: sum of squares; MS: mean squares; Est. Var.: estimated variance within and among populations