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Table 3 Animal-specific imputation accuracy (rcorrected) with 22 randomly selected animals (Ref22rand) in the reference population

From: Accuracy of imputation using the most common sires as reference population in layer chickens

MAF1 class

Ref22rand a

0.008–0.1

0.61 (0.006)b

0.1–0.2

0.82 (0.004)

0.2–0.3

0.86 (0.003)

0.3–0.4

0.88 (0.003)

0.4–0.5

0.83 (0.003)

  1. 1 Minor allele frequency
  2. a Values are the average across 10 random subsets of animals
  3. b The values in parentheses are standard errors