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Table 4 Percentage of adjacent SNP with average r 2 > 0.2 and > 0.3 according to marker panel density

From: Linkage disequilibrium, persistence of phase and effective population size estimates in Hereford and Braford cattle

% SNP kepta

Hereford

Braford

% r 2 > 0.2

% r 2 > 0.3

% r 2 > 0.2

% r 2 > 0.3

50 %

24.49

16.41

18.33

11.09

25 %

17.35

10.59

12.52

6.69

20 %

15.02

8.33

10.12

4.96

17 %

14.80

8.03

9.98

4.58

14 %

13.18

6.59

8.95

4.03

7 %

8.37

3.83

6.76

2.70

  1. aIn relation to the total number of SNP obtained for each population after the quality control (41,207 SNP in Hereford and 41,241 SNP in Braford)