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Table 5 Average r 2 ± SD and mean of length distances between adjacent markers in chromosomes

From: Linkage disequilibrium, persistence of phase and effective population size estimates in Hereford and Braford cattle

Chra

Length (Mb)

Hereford

Braford

n SNPb

Average r 2

n SNP

Average r 2

1

161.02

2697

0.24 ± 0.29

2699

0.17 ± 0.23

2

137.63

2197

0.23 ± 0.29

2200

0.18 ± 0.23

3

125.67

2000

0.21 ± 0.27

2001

0.17 ± 0.22

4

120.64

1987

0.23 ± 0.28

1988

0.16 ± 0.21

5

124.68

1732

0.20 ± 0.26

1734

0.16 ± 0.22

6

119.22

2066

0.26 ± 0.30

2069

0.20 ± 0.24

7

112.63

1824

0.25 ± 0.29

1824

0.19 ± 0.24

8

116.03

1958

0.23 ± 0.29

1959

0.18 ± 0.23

9

105.59

1670

0.23 ± 0.29

1671

0.17 ± 0.23

10

104.22

1760

0.21 ± 0.27

1761

0.16 ± 0.22

11

107.25

1805

0.20 ± 0.26

1806

0.16 ± 0.22

12

91.06

1342

0.21 ± 0.27

1344

0.15 ± 0.20

13

84.18

1449

0.19 ± 0.26

1449

0.15 ± 0.20

14

84.59

1471

0.23 ± 0.28

1471

0.18 ± 0.23

15

85.26

1374

0.19 ± 0.25

1374

0.15 ± 0.20

16

81.32

1314

0.21 ± 0.27

1314

0.16 ± 0.22

17

75.00

1249

0.20 ± 0.27

1250

0.15 ± 0.21

18

65.98

1036

0.21 ± 0.27

1038

0.16 ± 0.21

19

64.01

1058

0.17 ± 0.23

1059

0.14 ± 0.20

20

72.20

1264

0.19 ± 0.25

1264

0.15 ± 0.21

21

71.08

1124

0.20 ± 0.26

1124

0.16 ± 0.22

22

61.38

1021

0.20 ± 0.27

1025

0.15 ± 0.21

23

52.29

838

0.16 ± 0.23

838

0.13 ± 0.19

24

63.40

1014

0.21 ± 0.27

1018

0.16 ± 0.21

25

42.77

753

0.19 ± 0.25

755

0.15 ± 0.21

26

51.64

867

0.20 ± 0.27

867

0.14 ± 0.21

27

45.37

763

0.17 ± 0.24

764

0.14 ± 0.20

28

46.22

747

0.19 ± 0.24

747

0.13 ± 0.18

29

51.48

827

0.18 ± 0.25

828

0.13 ± 0.19

  1. aChromosomes
  2. bNumber of SNP