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Table 4 Haplotype diversity within Sdr4 and GA2OX3 genes and their mean GP in subpopulations

From: Genome-wide association mapping revealed a diverse genetic basis of seed dormancy across subpopulations in rice (Oryza sativa L.)

Gene

Hap

Indica

Aus

Japonica

  

No

GP %

No

GP %

No

GP %

Sdr4

Hap1

121

92.2 ± 15.9B

21

50.4 ± 38.2B

95

85.4 ± 20.9

 

Hap2

59

52.2 ± 30.5A

9

11.0 ± 30.9A

  
 

Hap3

17

57.4 ± 27.9A

    

GA2OX3

Hap1

167

73.0 ± 30.6B

20

21.5 ± 34.0A

11

83.6 ± 14.3A

 

Hap2

26

98.1 ± 3.5A

10

72.8 ± 28.0B

  
 

Hap3

4

92.7 ± 8.0A

  

83

85.5 ± 21.7A

  1. Hap Haplotype, SD standard deviation, No number of cultivars within a given population, GP germination percentage, means followed by different letters are significantly different at PË‚ 0.05
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BMC Genomic Data

ISSN: 2730-6844

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