Study on LOC426217 as a candidate gene for beak deformity in chicken

BMC Genomic Data

Table 5 Genetic diversity analysis of LOC426217 in beak-deformed birds

Loci	Genotype	Genotype frequency (n)	Allele	Allele frequency	χ ² value (P value)	PIC
G-62 T	GG	0.02 (3)	G T	0.10 0.90	1.37 (0.242)	0.163
	GT	0.16(28)
	TT	0.82 (140)
T24C	TT	0.24(41)	T C	0.535 0.465	5.80 (0.016)*	0.374
	TC	0.59(101)
	CC	0.17 (29)
G36C	GG	0.32 (54)	G C	0.594 0.406	3.77 (0.050)	0.366
	GC	0.55(95)
	CC	0.13 (22)
A192T	AA	0.56(96)	A T	0.760 0.240	1.33 (0.249)	0.298
	AT	0.40 (68)
	TT	0.04(7)
C204T	CC	0.59(101)	C T	0.781 0.219	1.98 (0.160)	0.284
	CT	0.38(65)
	TT	0.03 (5)
T222C	TT	0.50 (85)	T C	0.699 0.301	0.34 (1.562)	0.332
	TC	0.40(69)
	CC	0.10 (17)
G285T	GG	0.57 (97)	G T	0.772 0.228	4.38 (0.036)*	0.290
	GT	0.41(70)
	TT	0.02(4)
T363C	TT	0.82 (140)	T C	0.848 0.152	104.165 (<0.0001)*	0.225
	TC	0.06 (10)
	CC	0.12(21)

Note: χ ² value means the test values of different genotypes to Hardy-Weinberg equilibrium.* (P < 0.05) means the loci were not in agreement with the Hardy-Weinberg equilibrium

ISSN: 2730-6844