TY - JOUR AU - Gnansounou, E. PY - 2010 DA - 2010// TI - Production and use of lignocellulosic bioethanol in Europe: current situation and perspectives JO - Bioresour Technol. VL - 101 UR - https://doi.org/10.1016/j.biortech.2010.02.002 DO - 10.1016/j.biortech.2010.02.002 ID - Gnansounou2010 ER - TY - JOUR AU - Somerville, C. AU - Youngs, H. AU - Taylor, C. AU - Davis, S. C. AU - Long, S. P. PY - 2010 DA - 2010// TI - Feedstocks for lignocellulosic biofuels JO - Science. VL - 329 UR - https://doi.org/10.1126/science.1189268 DO - 10.1126/science.1189268 ID - Somerville2010 ER - TY - STD TI - Cheng KK, Cai BY, Zhang JA, Ling HZ, Zhou YH, Ge JP, Xu JM. Sugarcane bagasse hemicelluloses hydrolysate for ethanol production by acid recovery process. Biochem Eng J. 2008;38:105–9. ID - ref3 ER - TY - JOUR AU - Cardona, C. A. AU - Sanchez, O. J. PY - 2007 DA - 2007// TI - Fuel ethanol production: process design trends and integration opportunities JO - Bioresour Technol. VL - 98 UR - https://doi.org/10.1016/j.biortech.2007.01.002 DO - 10.1016/j.biortech.2007.01.002 ID - Cardona2007 ER - TY - JOUR AU - Schievano, A. AU - D’Imporzano, G. AU - Adani, F. PY - 2009 DA - 2009// TI - Substituting energy crops with organic wastes and agro-industrial residues for biogas production JO - J Environ Manag. VL - 90 UR - https://doi.org/10.1016/j.jenvman.2009.01.013 DO - 10.1016/j.jenvman.2009.01.013 ID - Schievano2009 ER - TY - JOUR AU - Sun, Y. AU - Cheng, J. PY - 2002 DA - 2002// TI - Hydrolysis of lignocellulosic materials for ethanol production: a review JO - Bioresour Technol. VL - 83 UR - https://doi.org/10.1016/S0960-8524(01)00212-7 DO - 10.1016/S0960-8524(01)00212-7 ID - Sun2002 ER - TY - JOUR AU - Wheals, A. E. AU - Basso, L. C. AU - Alves, D. M. G. AU - Amorim, H. V. PY - 1999 DA - 1999// TI - Fuel ethanol after 25 years JO - Trends Biotechnol. VL - 17 UR - https://doi.org/10.1016/S0167-7799(99)01384-0 DO - 10.1016/S0167-7799(99)01384-0 ID - Wheals1999 ER - TY - JOUR AU - Farrar, K. AU - Bryant, D. N. AU - Turner, L. AU - Gallagher, J. A. AU - Thomas, A. AU - Farrell, M. PY - 2012 DA - 2012// TI - Breeding for bio-ethanol production in Lolium perenne L.: association of allelic variation with high water-soluble carbohydrate content JO - Bioenergy Res VL - 5 UR - https://doi.org/10.1007/s12155-011-9156-0 DO - 10.1007/s12155-011-9156-0 ID - Farrar2012 ER - TY - JOUR AU - Eshed, Y. AU - Zamir, D. PY - 1995 DA - 1995// TI - An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL JO - Genetics. VL - 141 ID - Eshed1995 ER - TY - JOUR AU - Gírio, F. M. AU - Fonseca, C. AU - Carvalheiro, F. AU - Duarte, L. C. AU - Marques, S. AU - Bogel-Łukasik, R. PY - 2010 DA - 2010// TI - Hemicelluloses for fuel ethanol: a review JO - Bioresour Technol. VL - 101 UR - https://doi.org/10.1016/j.biortech.2010.01.088 DO - 10.1016/j.biortech.2010.01.088 ID - Gírio2010 ER - TY - JOUR AU - Liu, H. AU - Zhu, J. Y. AU - Fu, S. PY - 2010 DA - 2010// TI - Effects of lignin-metal complexation on enzymatic hydrolysis of cellulose JO - J Agric Food Chem. VL - 58 UR - https://doi.org/10.1021/jf1001588 DO - 10.1021/jf1001588 ID - Liu2010 ER - TY - JOUR AU - Saha, B. D. PY - 2003 DA - 2003// TI - Hemicellulose bioconversion JO - J Ind Microbiol Biotechnol. VL - 30 UR - https://doi.org/10.1007/s10295-003-0049-x DO - 10.1007/s10295-003-0049-x ID - Saha2003 ER - TY - STD TI - SGN website (http://solgenomics.net/). UR - http://solgenomics.net/ ID - ref13 ER - TY - JOUR AU - Gur, A. AU - Semel, Y. AU - Osorio, S. AU - Friedmann, M. AU - Seekh, S. AU - Ghareeb, B. PY - 2011 DA - 2011// TI - Yield quantitative trait loci from wild tomato are predominately expressed by the shoot JO - Theor Appl Genet. VL - 122 UR - https://doi.org/10.1007/s00122-010-1456-9 DO - 10.1007/s00122-010-1456-9 ID - Gur2011 ER - TY - JOUR AU - Lander, E. S. AU - Botstein, D. PY - 1989 DA - 1989// TI - Mapping mendelian factors underlying quantitative traits using RFLP linkage maps JO - Genetics. VL - 121 ID - Lander1989 ER - TY - JOUR AU - Darvasi, A. AU - Soller, M. PY - 1985 DA - 1985// TI - Selective genotyping for determination of linkage between a marker locus and a quantitative trait locus JO - Theor Appl Genetics. VL - 1992 ID - Darvasi1985 ER - TY - JOUR AU - Acker, R. AU - Vanholme, R. AU - Storme, V. AU - Mortimer, J. C. AU - Dupree, P. AU - Boerjan, W. PY - 2013 DA - 2013// TI - Lignin biosynthesis perturbations affect secondary cell wall composition and saccharification yield in Arabidopsis thaliana JO - Biotechnol Biofuels. VL - 6 UR - https://doi.org/10.1186/1754-6834-6-1 DO - 10.1186/1754-6834-6-1 ID - Acker2013 ER - TY - JOUR AU - Souza, P. AU - Kamei, C. L. AU - Torres, F. AU - Pattathil, S. AU - Hahn, M. G. AU - Trindade, L. M. PY - 2015 DA - 2015// TI - How cell wall complexity influences saccharification efficiency in Miscanthus sinensis JO - J Exp Bot. VL - 66 UR - https://doi.org/10.1093/jxb/erv183 DO - 10.1093/jxb/erv183 ID - Souza2015 ER - TY - JOUR AU - Chen, F. AU - Dixon, R. A. PY - 2007 DA - 2007// TI - Lignin modification improves fermentable sugar yields for biofuel production JO - Nature Biotechnol. VL - 25 UR - https://doi.org/10.1038/nbt1316 DO - 10.1038/nbt1316 ID - Chen2007 ER - TY - JOUR AU - Coleman, H. D. AU - Beamish, L. AU - Reid, A. AU - Park, J. Y. AU - Mansfield, S. D. PY - 2010 DA - 2010// TI - Altered sucrose metabolism impacts plant biomass production and flower development JO - Transgenic Res. VL - 19 UR - https://doi.org/10.1007/s11248-009-9309-5 DO - 10.1007/s11248-009-9309-5 ID - Coleman2010 ER - TY - JOUR AU - Lorenz, A. J. AU - Anex, R. P. AU - Isci, A. AU - Coors, J. G. AU - Leon, N. AU - Weimer, P. J. PY - 2009 DA - 2009// TI - Forage quality and composition measurements as predictors of ethanol yield from maize (Zea mays L.) stover JO - Biotechnol Biofuels VL - 2 UR - https://doi.org/10.1186/1754-6834-2-5 DO - 10.1186/1754-6834-2-5 ID - Lorenz2009 ER - TY - JOUR AU - Slavov, G. AU - Allison, G. AU - Bosch, M. PY - 2013 DA - 2013// TI - Advances in the genetic dissection of plant cell walls: tools and resources available in Miscanthus JO - Front Plant Sci. VL - 4 UR - https://doi.org/10.3389/fpls.2013.00217 DO - 10.3389/fpls.2013.00217 ID - Slavov2013 ER - TY - JOUR AU - Scheller, H. V. AU - Ulvskov, P. PY - 2010 DA - 2010// TI - Hemicelluloses JO - Ann Rev Plant Biol. VL - 61 UR - https://doi.org/10.1146/annurev-arplant-042809-112315 DO - 10.1146/annurev-arplant-042809-112315 ID - Scheller2010 ER - TY - JOUR AU - Silveira, R. L. AU - Stoyanov, S. R. AU - Gusarov, S. AU - Skaf, M. S. AU - Kovalenko, A. PY - 2013 DA - 2013// TI - Plant Biomass Recalcitrance: Effect of Hemicellulose Composition on Nanoscale Forces that Control Cell Wall Strength JO - J Am Chem Soc. VL - 135 UR - https://doi.org/10.1021/ja405634k DO - 10.1021/ja405634k ID - Silveira2013 ER - TY - JOUR AU - Yoshida, M. AU - Liu, Y. AU - Uchida, S. AU - Kawarada, K. AU - Ukagami, Y. AU - Ichinose, H. PY - 2008 DA - 2008// TI - Effects of cellulose crystallinity, hemicellulose, and lignin on the enzymatic hydrolysis of Miscanthus sinensis to monosaccharides JO - Biosci Biotechnol Biochem. VL - 72 UR - https://doi.org/10.1271/bbb.70689 DO - 10.1271/bbb.70689 ID - Yoshida2008 ER - TY - JOUR AU - Lima, M. A. AU - Lavorente, G. B. AU - Silva, H. K. P. AU - Bragatto, J. AU - Rezende, C. A. AU - Bernardinelli, O. D. PY - 2013 DA - 2013// TI - Effects of pretreatment on morphology, chemical composition and enzymatic digestibility of eucalyptus bark: a potentially valuable source of fermentable sugars for biofuel production – part 1 JO - Biotechnol Biofuels. VL - 6 UR - https://doi.org/10.1186/1754-6834-6-75 DO - 10.1186/1754-6834-6-75 ID - Lima2013 ER - TY - JOUR AU - Xu, N. AU - Zhang, W. AU - Ren, S. F. AU - Liu, F. AU - Zhao, C. Q. AU - Liao, H. F. PY - 2012 DA - 2012// TI - Hemicelluloses negatively affect lignocellulose crystallinity for high biomass digestibility under NaOH and H2SO4 pretreatments in Miscanthus JO - Biotechnol Biofuels. VL - 5 UR - https://doi.org/10.1186/1754-6834-5-58 DO - 10.1186/1754-6834-5-58 ID - Xu2012 ER - TY - JOUR AU - Saha, B. D. AU - Iten, L. B. AU - Cotta, M. A. AU - Wu, Y. V. PY - 2005 DA - 2005// TI - Dilute acid pretreatment, enzymatic saccharification, and fermentation of rice hulls to ethanol JO - Biotechnol Prog. VL - 21 UR - https://doi.org/10.1021/bp049564n DO - 10.1021/bp049564n ID - Saha2005 ER - TY - JOUR AU - Macdonald, D. G. AU - Bakhshi, N. N. AU - Mathews, J. F. AU - Roychowdhury, A. AU - Bajpai, P. AU - Moo-Young, M. PY - 1983 DA - 1983// TI - Alkali treatment of corn stover to improve sugar production by enzymatic hydrolysis JO - Biotechnol Bioeng. VL - 25 UR - https://doi.org/10.1002/bit.260250815 DO - 10.1002/bit.260250815 ID - Macdonald1983 ER - TY - JOUR AU - Adani, F. AU - Papa, G. AU - Schievano, A. AU - Cardinale, G. AU - D’Imporzano, G. AU - Tambone, F. PY - 2011 DA - 2011// TI - Nanoscale structure of the cell wall protecting cellulose from enzyme attack JO - Environ Sci Technol. VL - 45 UR - https://doi.org/10.1021/es1020263 DO - 10.1021/es1020263 ID - Adani2011 ER - TY - JOUR AU - Li, F. AU - Ren, S. AU - Zhang, W. AU - Xu, Z. AU - Xie, G. AU - Chen, Y. PY - 2013 DA - 2013// TI - Arabinose substitution degree in xylan positively affects lignocellulose enzymatic digestibility after various NaOH/H2SO4 pretreatments in Miscanthus JO - Bioresour Technol. VL - 130 UR - https://doi.org/10.1016/j.biortech.2012.12.107 DO - 10.1016/j.biortech.2012.12.107 ID - Li2013 ER - TY - JOUR PY - 2012 DA - 2012// TI - The tomato genome sequence provides insights into fleshy fruit evolution JO - Nature VL - 485 UR - https://doi.org/10.1038/nature11119 DO - 10.1038/nature11119 ID - ref32 ER - TY - JOUR AU - Yokoyama, R. AU - Nishitani, K. PY - 2004 DA - 2004// TI - Genomic basis for cell-wall diversity in plants. A comparative approach to gene families in rice and Arabidopsis JO - Plant Cell Physiol VL - 45 UR - https://doi.org/10.1093/pcp/pch151 DO - 10.1093/pcp/pch151 ID - Yokoyama2004 ER - TY - JOUR AU - Gardner, S. L. AU - Burrell, M. M. AU - Fry, S. C. PY - 2002 DA - 2002// TI - Screening of Arabidopsis thaliana stems for variation in cell wall polysaccharides JO - Phytochemistry. VL - 60 UR - https://doi.org/10.1016/S0031-9422(02)00046-8 DO - 10.1016/S0031-9422(02)00046-8 ID - Gardner2002 ER - TY - STD TI - Morgan MJ, Osorio S, Gehl B, Baxter CJ, Kruger NJ, Ratcliffe RG, Fernie AR, Sweetlove LJ. Metabolic engineering of tomato fruit organic acid content guided by biochemical analysis of an introgression line. Plant Physiol. 2013;161(1):397–407. doi:10.1104/pp.112.209619157:998-1014e. ID - ref35 ER - TY - JOUR AU - Lande, R. PY - 1983 DA - 1983// TI - The response to selection on major and minor mutations affecting a metrical trait JO - Heredity. VL - 50 UR - https://doi.org/10.1038/hdy.1983.6 DO - 10.1038/hdy.1983.6 ID - Lande1983 ER - TY - JOUR AU - Eshed, Y. AU - Zamir, D. PY - 1994 DA - 1994// TI - A genomic library of Lycopersicon pennellii in L. esculentum: A tool for fine mapping of genes JO - Euphytica VL - 79 UR - https://doi.org/10.1007/BF00022516 DO - 10.1007/BF00022516 ID - Eshed1994 ER - TY - JOUR AU - Klinghammer, M. AU - Tenhaken, R. PY - 2007 DA - 2007// TI - Genome-wide analysis of the UDP-glucose dehydrogenase gene family in Arabidopsis, a key enzyme for matrix polysaccharides in cell walls JO - J Exp Bot. VL - 58 UR - https://doi.org/10.1093/jxb/erm209 DO - 10.1093/jxb/erm209 ID - Klinghammer2007 ER - TY - JOUR AU - Chiniquy, D. AU - Sharma, V. AU - Schultink, A. AU - Baidoo, E. E. AU - Rautengarten, C. AU - Cheng, K. PY - 2012 DA - 2012// TI - XAX1 from glycosyltransferase family 61 mediates xylosyltransfer to rice xylan JO - Proc Natl Acad Sci USA VL - 109 UR - https://doi.org/10.1073/pnas.1202079109 DO - 10.1073/pnas.1202079109 ID - Chiniquy2012 ER - TY - JOUR AU - Tang, G. Q. AU - Lüscher, M. AU - Sturm, A. PY - 1999 DA - 1999// TI - Antisense repression of vacuolar and cell wall invertase in transgenic carrot alters early plant development and sucrose partitioning JO - Plant Cell. VL - 11 UR - https://doi.org/10.1105/tpc.11.2.177 DO - 10.1105/tpc.11.2.177 ID - Tang1999 ER - TY - JOUR AU - Cocuron, J. C. AU - Lerouxel, O. AU - Drakakaki, G. AU - Alonso, A. P. AU - Liepman, A. H. AU - Keegstra, K. PY - 2007 DA - 2007// TI - A gene from the cellulose synthase-like C family encodes a beta-1,4 glucan synthase JO - Proc Ntl Academy Sci USA VL - 104 UR - https://doi.org/10.1073/pnas.0703133104 DO - 10.1073/pnas.0703133104 ID - Cocuron2007 ER - TY - JOUR AU - Boerjan, W. AU - Ralph, J. AU - Boucher, M. PY - 2003 DA - 2003// TI - Lignin biosynthesis JO - Annual Rev Plant Biol. VL - 54 UR - https://doi.org/10.1146/annurev.arplant.54.031902.134938 DO - 10.1146/annurev.arplant.54.031902.134938 ID - Boerjan2003 ER - TY - JOUR AU - Marriott, P. E. AU - Sibout, R. AU - Lapierre, C. AU - Fangel, J. U. AU - Willats, W. G. AU - Hofte, H. PY - 2014 DA - 2014// TI - Range of cell-wall alterations enhance saccharification in Brachypodium distachyon mutants JO - Proc Natl Academy Sci USA VL - 111 UR - https://doi.org/10.1073/pnas.1414020111 DO - 10.1073/pnas.1414020111 ID - Marriott2014 ER - TY - JOUR AU - Carli, P. AU - Arima, S. AU - Fogliano, V. AU - Tardella, L. AU - Frusciante, L. AU - Ercolano, M. R. PY - 2009 DA - 2009// TI - Use of network analysis as tool to capture key traits affecting tomato organoleptic quality JO - J Exp Bot. VL - 60 UR - https://doi.org/10.1093/jxb/erp177 DO - 10.1093/jxb/erp177 ID - Carli2009 ER - TY - JOUR AU - Steinhauser, M. C. AU - Steinhauser, D. AU - Gibon, Y. AU - Bolger, M. AU - Arrivault, S. AU - Usadel, B. PY - 2011 DA - 2011// TI - Identification of enzyme activity quantitative trait loci in a Solanum lycopersicum x Solanum pennellii introgression line population JO - Plant Physiol. VL - 157 UR - https://doi.org/10.1104/pp.111.181594 DO - 10.1104/pp.111.181594 ID - Steinhauser2011 ER - TY - STD TI - Dowe N, Mcmillan J. SSF experimental protocols - lignocellulosic biomass hydrolysis and fermentation. National Renewable Energy Laboratory (NREL), Technical Report TP-510-42630). 2008;1:1–16. ID - ref46 ER - TY - STD TI - Capareda S. Introduction to Biomass Energy Conversions. Science, Chapter 4. CRC Press, Boca Raton, FL, 2013. ID - ref47 ER - TY - JOUR AU - Gomez, L. AU - Whitehead, C. AU - Barakate, A. AU - Halpin, C. AU - McQueen-Mason, S. J. PY - 2010 DA - 2010// TI - Automated saccharification assay for determination of digestibility in plant materials JO - Biotechnol Biofuels. VL - 3 UR - https://doi.org/10.1186/1754-6834-3-23 DO - 10.1186/1754-6834-3-23 ID - Gomez2010 ER -