|  | Most significant SNP | Haplotype-based | Nearby genesg | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Traita | SSCb | Positionc (bp) | refSNP variation ID | EAd | EAFd | β (SE) | Proportione | P-value | P-valuef |  | |
Growth | |||||||||||
 | DG | 1 | 304,667,314 | rs81352956 | A | 0.454 | −34.75 (6.035) | 0.06 | 1.22 × 10−8 | 6.71 × 10−6 h | PRDM12_EXOSC2 |
 | BF | 1 | 304,694,455 | rs81352969 | A | 0.495 | 0.18 (0.029) | 0.07 | 6.30 × 10−10 | 2.26 × 10−5 h | ABL1 |
 |  | 10 | 27,636,391 | rs81422289 | G | 0.227 | 0.17 (0.034) | 0.04 | 7.04 × 10−7 | 3.63 × 10−2 | KIF14 |
Body measurements | |||||||||||
 | CW | 1 | 304,694,455 | rs81352969 | A | 0.495 | 0.45 (0.084) | 0.05 | 1.17 × 10−7 | 1.45 × 10−4 | ABL1 |
 | CC | 1 | 304,694,455 | rs81352969 | A | 0.495 | 0.87 (0.148) | 0.06 | 6.82 × 10−9 | 3.36 × 10−5 h | ABL1 |
 | CCB at F105 | 7 | 39,512,713 | rs80892802 | G | 0.171 | 0.29 (0.045) | 0.07 | 3.14 × 10−10 | 1.75 × 10−3 | DNAH8 |
 | CCB at R105 | 7 | 39,089,506 | rs196955082 | G | 0.249 | 0.21 (0.039) | 0.05 | 4.38 × 10−8 | 1.19 × 10−3 | BTBD9 |
Carcass measurements | |||||||||||
 | CL | 7 | 103,457,401 | VRTN | C | 0.368 | 1.13 (0.187) | 0.14 | 3.64 × 10−9 | 3.36 × 10−6 h | VRTN |
 | CL1 | 7 | 103,457,401 | VRTN | C | 0.368 | 1.13 (0.162) | 0.18 | 1.56 × 10−11 | 4.87 × 10−8 H | VRTN |
 | CL2 | 7 | 103,457,401 | VRTN | C | 0.368 | 1.37 (0.172) | 0.22 | 2.96 × 10−14 | 2.22 × 10−9 H | VRTN |
 |  | 7 | 107,279,922 | rs80977788 | G | 0.267 | −0.97 (0.196) | 0.09 | 1.20 × 10−6 | 1.25 × 10−5 h | NRXN3 |
 | CL3 | 7 | 103,457,401 | VRTN | C | 0.368 | 1.48 (0.159) | 0.27 | 3.10 × 10−18 | 1.94 × 10−11 H | VRTN |
 |  | 7 | 106,308,596 | rs80813652 | G | 0.311 | 1.02 (0.177) | 0.12 | 2.14 × 10−8 | 1.55 × 10−5 h | LOC102158165 |
 |  | 11 | 53,204,914 | rs330963199 | G | 0.253 | −1.00 (0.191) | 0.10 | 3.32 × 10−7 | 1.31 × 10−2 | LOC102167198 |
 | TVN | 7 | 101,863,838 | rs80966250 | G | 0.349 | −0.35 (0.059) | 0.13 | 9.93 × 10−9 | 4.44 × 10−16 H | LOC102164420_LOC102164550 |
 |  | 7 | 103,457,401 | VRTN | C | 0.368 | 0.67 (0.046) | 0.50 | 9.42 × 10−37 | 4.44 × 10−16 H | VRTN |
 |  | 7 | 106,308,596 | rs80813652 | G | 0.311 | 0.44 (0.056) | 0.20 | 5.17 × 10−14 | 2.67 × 10−9 H | LOC102158165 |
 | BSFT | 18 | 7,107,781 | rs81345146 | A | 0.361 | −0.19 (0.037) | 0.10 | 4.37 × 10−7 | 7.80 × 10−4 | ZYX |
 | LSFT | 9 | 46,466,374 | rs81257576 | A | 0.017 | 0.65 (0.129) | 0.07 | 7.36 × 10−7 | 4.41 × 10−1 | ZBTB16_NNMT |
 | LEA at 45r | 9 | 124,098,143 | rs81415869 | G | 0.023 | 3.98 (0.746) | 0.10 | 1.94 × 10−7 | 8.35 × 10−1 | LOC102162561_LOC100524389 |
Fat area of carcass cross section at 4–5 rib | |||||||||||
 | IFAat 45r | 8 | 25,653,506 | rs81398418 | A | 0.279 | 7.15 (1.380) | 0.09 | 4.18 × 10−7 | 1.14 × 10−4 | LOC100624133_LOC102162593 |
Fat area of carcass cross section at the middle | |||||||||||
 | SFA at HBL | 7 | 41,720,015 | rs80928067 | G | 0.030 | −16.52 (3.219) | 0.11 | 5.35 × 10−7 | 5.11 × 10−1 | LOC100737927 |
 | ALLFA at HBL | 7 | 41,720,015 | rs80928067 | G | 0.030 | −30.43 (5.433) | 0.13 | 5.09 × 10−8 | 5.41 × 10−1 | LOC100737927 |