Skip to main content

Table 2 Significant VIP variants in Mongols compared with the eleven populations which selected from 1000 genomes project

From: Genetic polymorphisms of pharmacogenomic VIP variants in the Mongol of Northwestern China

SNP ID p < 0.05
ASW CDX CEU CHB GIH JPT LWK MXL PUR TSI YRI
rs10264272 1.42E-05 - - - - - 1.01E-01 1.35E-10 3.35E-06 7.27E-48 3.30E-02
rs1042713 1.90E-01 2.05E-01 2.09E-01 1.90E-01 1.74E-01 1.70E-01 1.63E-01 1.57E-01 1.84E-01 2.00E-01 1.83E-01
rs1042714 1.29E-01 1.31E-01 2.37E-01 1.30E-01 1.17E-01 1.32E-01 1.19E-01 1.27E-01 1.95E-01 1.87E-01 1.29E-01
rs1045642 2.25E-01 1.59E-01 2.35E-01 1.58E-01 2.36E-01 1.88E-01 2.43E-01 1.86E-01 1.61E-01 1.81E-01 2.49E-01
rs1051266 1.54E-01 1.67E-01 2.22E-01 1.98E-01 2.41E-01 1.64E-01 2.01E-01 2.65E-01 2.20E-01 2.12E-01 1.93E-01
rs1065776 7.08E-02 1.10E-05 8.68E-04 1.09E-04 8.98E-03 2.49E-03 7.70E-02 4.22E-04 4.99E-03 9.58E-05 8.60E-02
rs10735810 4.49E-01 2.18E-01 2.79E-01 2.83E-01 3.77E-01 3.30E-01 4.69E-01 2.42E-01 3.16E-01 3.10E-01 4.55E-01
rs10929302 1.62E-01 7.71E-02 1.47E-01 7.55E-02 2.47E-01 7.73E-02 1.85E-01 1.74E-01 1.61E-01 1.00E-01 1.87E-01
rs1128503 4.27E-01 1.45E-01 2.53E-01 1.68E-01 1.73E-01 1.56E-01 4.73E-01 2.29E-01 2.69E-01 2.59E-01 4.48E-01
rs1131596 1.94E-01 1.59E-01 2.04E-01 1.81E-01 2.21E-01 1.61E-01 2.56E-01 2.42E-01 2.00E-01 1.94E-01 2.37E-01
rs1138272 4.98E-07 6.87E-16 4.54E-03 6.87E-16 2.20E-03 6.87E-16 6.75E-09 2.13E-04 6.74E-06 1.43E-04 6.87E-16
rs1142345 4.41E-03 1.55E-06 8.22E-07 2.81E-16 7.94E-08 5.19E-09 9.34E-03 4.20E-05 3.05E-03 9.93E-11 2.63E-04
rs11568820 4.50E-01 1.56E-01 1.09E-01 2.10E-01 1.89E-01 2.38E-01 5.72E-01 1.15E-01 1.13E-01 1.06E-01 6.86E-01
rs1229984 2.02E-01 3.25E-01 2.00E-01 3.79E-01 1.98E-01 3.96E-01 2.02E-01 1.88E-01 1.92E-01 1.94E-01 2.02E-01
rs12659 2.31E-01 1.65E-01 2.21E-01 1.88E-01 2.51E-01 1.60E-01 1.66E-01 2.62E-01 2.19E-01 2.09E-01 1.90E-01
rs12720441 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00 1.00E + 00
rs1540339 3.35E-01 1.98E-01 2.90E-01 2.11E-01 2.72E-01 2.17E-01 4.10E-01 2.53E-01 2.82E-01 2.69E-01 3.65E-01
rs1544410 1.27E-01 3.56E-02 2.98E-01 3.26E-02 2.59E-01 4.48E-02 1.13E-01 7.41E-02 2.43E-01 2.49E-01 1.47E-01
rs16947 2.23E-01 9.14E-02 1.54E-01 9.11E-02 2.41E-01 9.15E-02 4.12E-01 1.10E-01 2.01E-01 1.90E-01 3.38E-01
rs1695 2.42E-01 1.06E-01 1.95E-01 1.09E-01 1.39E-01 1.14E-01 2.81E-01 3.22E-01 1.79E-01 1.29E-01 1.98E-01
rs17238540 3.20E-03 - 1.07E-15 - - - 2.03E-03 9.22E-07 1.14E-12 6.91E-08 2.99E-03
rs17244841 3.79E-03 4.44E-45 2.57E-12 4.44E-45 4.44E-45 1.82E-10 1.81E-03 3.30E-06 8.88E-13 4.29E-07 2.75E-03
rs1799853 1.71E-06 - 2.34E-02 - 1.22E-05 - - 3.82E-03 1.69E-02 2.50E-02 -
rs1800460 9.41E-09 4.44E-45 1.66E-07 4.44E-45 4.44E-45 4.44E-45 4.44E-45 3.30E-06 2.57E-05 5.05E-13 4.44E-45
rs1800497 2.14E-01 2.22E-01 1.24E-01 2.16E-01 1.20E-01 1.84E-01 1.77E-01 2.16E-01 1.19E-01 1.22E-01 1.86E-01
rs1800888 - - 1.07E-15 - - - - - - 6.14E-17 -
rs1801131 1.07E-01 1.26E-01 1.51E-01 1.05E-01 2.12E-01 1.10E-01 1.09E-01 1.11E-01 1.06E-01 1.41E-01 1.13E-01
rs1801133 1.40E-01 1.40E-01 1.25E-01 2.32E-01 1.38E-01 1.74E-01 1.46E-01 2.34E-01 2.19E-01 2.33E-01 1.43E-01
rs1801252 6.55E-02 6.41E-02 6.28E-02 6.45E-02 6.35E-02 6.43E-02 1.47E-01 1.15E-01 8.73E-02 5.96E-02 8.24E-02
rs1801253 2.01E-01 8.00E-02 1.68E-01 8.58E-02 9.53E-02 6.70E-02 1.53E-01 6.09E-02 9.70E-02 1.82E-01 2.94E-01
rs1801272 9.73E-01 9.83E-01 9.43E-01 9.83E-01 9.72E-01 9.83E-01 9.83E-01 9.65E-01 9.77E-01 9.30E-01 9.83E-01
rs1805124 1.22E-01 2.93E-02 6.49E-02 3.75E-02 7.93E-02 3.85E-02 1.55E-01 5.42E-02 1.20E-01 1.00E-01 1.77E-01
rs20417 6.15E-01 9.18E-01 7.73E-01 9.06E-01 7.81E-01 9.17E-01 6.48E-01 7.29E-01 7.28E-01 8.22E-01 5.42E-01
rs2046934 7.68E-02 7.56E-02 7.82E-02 7.93E-02 7.48E-02 7.71E-02 7.48E-02 7.54E-02 7.44E-02 7.61E-02 7.73E-02
rs2066702 6.37E-02 - - - - - 1.79E-02 3.41E-08 2.32E-10 - 1.45E-01
rs2066853 1.69E-01 1.99E-01 2.60E-01 1.58E-01 2.51E-01 1.79E-01 1.94E-01 2.45E-01 2.39E-01 2.58E-01 1.75E-01
rs2228570 1.75E-01 2.40E-01 1.84E-01 1.80E-01 1.51E-01 1.43E-01 1.82E-01 2.17E-01 1.53E-01 1.58E-01 1.77E-01
rs2239179 1.37E-01 1.44E-01 2.39E-01 1.54E-01 2.39E-01 1.59E-01 1.47E-01 1.38E-01 1.99E-01 1.80E-01 1.39E-01
rs2239185 2.69E-01 1.33E-01 3.05E-01 1.41E-01 2.42E-01 1.32E-01 3.30E-01 1.82E-01 2.94E-01 2.96E-01 2.92E-01
rs2740574 6.05E-01 3.29E-12 8.71E-08 3.29E-12 1.99E-03 3.29E-12 7.90E-01 1.22E-03 5.35E-02 4.58E-06 7.11E-01
rs28371706 2.11E-02 - - - - - 5.24E-02 - 3.96E-24 - 1.14E-01
rs28371725 7.01E-04 7.46E-03 2.18E-02 1.65E-03 3.43E-02 3.16E-04 1.41E-03 6.68E-04 2.13E-02 3.39E-02 4.43E-04
rs28399433 2.33E-02 6.01E-02 1.44E-02 1.27E-01 6.80E-02 1.37E-01 2.10E-02 2.26E-02 2.25E-02 1.69E-02 2.27E-02
rs28399454 5.13E-04 - - - - - 4.87E-05 - 3.96E-24 - 1.45E-02
rs28399499 3.79E-03 4.44E-45 4.44E-45 4.44E-45 4.44E-45 4.44E-45 1.77E-04 9.37E-19 1.82E-10 4.44E-45 8.27E-03
rs3211371 3.94E-01 4.14E-01 3.57E-01 4.14E-01 3.56E-01 4.08E-01 4.14E-01 3.63E-01 3.57E-01 3.50E-01 4.08E-01
rs36210421 - - 6.00E-06 - 5.70E-46 6.74E-47 - 2.15E-29 - 6.14E-17 -
rs3745274 1.79E-01 1.61E-01 1.26E-01 8.04E-02 2.18E-01 8.94E-02 1.83E-01 1.50E-01 1.74E-01 1.43E-01 2.17E-01
rs3760091 1.69E-01 1.79E-01 1.60E-01 1.64E-01 2.31E-01 1.65E-01 1.82E-01 1.78E-01 1.68E-01 1.85E-01 1.79E-01
rs3782905 5.54E-01 6.44E-01 4.26E-01 6.28E-01 5.24E-01 6.82E-01 5.48E-01 5.66E-01 4.68E-01 4.46E-01 5.58E-01
rs3807375 1.14E-01 1.07E-01 3.91E-01 1.06E-01 3.59E-01 1.11E-01 1.11E-01 2.19E-01 3.31E-01 3.97E-01 1.08E-01
rs3814055 1.27E-01 1.53E-01 1.43E-01 1.31E-01 1.91E-01 1.35E-01 1.25E-01 1.42E-01 1.89E-01 1.56E-01 1.31E-01
rs3815459 2.70E-01 1.82E-01 4.25E-01 1.61E-01 3.22E-01 1.87E-01 2.89E-01 2.83E-01 3.54E-01 3.97E-01 3.27E-01
rs3846662 3.96E-01 1.86E-01 1.60E-01 1.90E-01 2.68E-01 1.97E-01 4.66E-01 1.55E-01 1.85E-01 1.58E-01 4.58E-01
rs3918290 5.03E-28 - 3.18E-44 - 2.72E-16 - - - - 7.27E-48 -
rs4124874 4.33E-01 2.03E-01 1.92E-01 1.47E-01 3.05E-01 1.37E-01 5.27E-01 2.44E-01 2.24E-01 1.98E-01 5.38E-01
rs4148323 9.94E-02 1.05E-01 9.82E-02 9.89E-02 1.01E-01 1.05E-01 9.82E-02 1.01E-01 9.82E-02 9.82E-02 9.82E-02
rs4149056 3.68E-02 4.68E-02 4.74E-02 4.64E-02 2.73E-02 4.48E-02 2.74E-02 3.90E-02 4.48E-02 8.70E-02 2.48E-02
rs4244285 6.40E-02 1.19E-01 6.35E-02 1.72E-01 1.68E-01 1.62E-01 8.47E-02 6.31E-02 6.34E-02 6.01E-02 6.53E-02
rs4680 1.23E-01 1.23E-01 2.29E-01 1.34E-01 2.10E-01 1.20E-01 1.20E-01 1.85E-01 1.85E-01 1.54E-01 1.54E-01
rs4986893 1.93E-04 6.14E-03 1.93E-04 2.27E-03 2.96E-04 5.46E-03 4.39E-04 1.93E-04 1.93E-04 1.93E-04 1.93E-04
rs4986910 5.03E-28 - 1.07E-15 - - - - - 6.74E-47 - -
rs4986913 - - - - 5.70E-46 - - - - - -
rs5219 1.85E-01 1.64E-01 1.59E-01 1.57E-01 1.79E-01 1.38E-01 2.13E-01 1.72E-01 1.49E-01 1.49E-01 2.14E-01
rs59421388 1.71E-06 - - - - - 3.66E-02 - 6.74E-47 - 4.90E-03
rs6025 4.44E-45 4.44E-45 1.42E-08 4.44E-45 7.17E-24 4.44E-45 4.44E-45 9.37E-19 1.36E-16 2.56E-24 4.44E-45
rs61736512 1.71E-06 - - - - - 3.66E-02 - 6.74E-47 - 6.07E-03
rs6277 4.28E-02 1.69E-02 3.46E-01 1.42E-02 1.87E-01 2.09E-02 9.87E-03 1.66E-01 2.93E-01 4.45E-01 1.22E-02
rs6791924 6.55E-05 - - - - - 2.96E-02 1.35E-10 3.96E-24 - 1.66E-03
rs689466 1.74E-01 2.50E-01 1.61E-01 2.17E-01 1.75E-01 1.99E-01 1.92E-01 1.47E-01 1.50E-01 1.60E-01 1.85E-01
rs698 7.48E-02 7.35E-02 2.80E-01 6.65E-02 1.29E-01 6.98E-02 7.49E-02 1.29E-01 1.91E-01 1.48E-01 6.94E-02
rs701265 3.38E-01 1.81E-01 1.87E-01 1.55E-01 1.76E-01 1.58E-01 4.38E-01 1.77E-01 1.65E-01 1.88E-01 4.39E-01
rs7294 2.93E-01 5.96E-02 1.57E-01 4.55E-02 4.69E-01 5.39E-02 2.53E-01 1.88E-01 1.79E-01 1.75E-01 3.28E-01
rs7626962 6.55E-05 - - - - - 1.98E-08 - 1.68E-16 - 1.18E-03
rs776746 5.43E-01 1.66E-01 1.26E-02 1.66E-01 1.36E-01 1.17E-01 7.44E-01 1.01E-01 1.25E-01 1.45E-02 6.95E-01
rs7975232 3.26E-01 1.42E-01 3.01E-01 1.41E-01 2.46E-01 1.37E-01 3.90E-01 1.77E-01 2.94E-01 2.96E-01 3.05E-01
rs890293 3.42E-01 4.34E-01 4.12E-01 4.16E-01 4.10E-01 4.29E-01 3.58E-01 4.24E-01 4.04E-01 4.11E-01 3.48E-01
rs975833 2.05E-01 3.46E-01 2.09E-01 3.72E-01 1.91E-01 3.80E-01 2.28E-01 2.50E-01 2.17E-01 1.99E-01 1.88E-01
rs9934438 6.28E-01 7.43E-02 3.64E-01 6.42E-02 6.01E-01 7.08E-02 7.79E-01 3.29E-01 3.99E-01 3.22E-01 7.49E-01
  1. aItalics indicated that after adjustment p < 0.05 the locus has statistically significant
  2. bThe results has not the mathematics sense