Skip to main content

Table 6 SNP markers identified in association mapping of P. sojae resistance

From: Phenotypic evaluation and genetic dissection of resistance to Phytophthora sojae in the Chinese soybean mini core collection

Isolate

SNP markers

Chr

Position

Naive

GLM

MLM

Co-located traita

-log10 P

R 2(%)

-log10 P

R 2(%)

-log10 P

R 2(%)

HLJ08-17

Q-15-0369188

15

48863575

5.08

10.35

4.12

8.35

2.85

6.27

New

P7063

Q-03-0266907

3

36634361

5.18

10.43

3.14

5.53

1.82

3.23

SCN [43]

P7063

Q-15-0128012

15

15532390

5.87

13.67

3.60

7.91

2.00

5.05

SCN [44]

H15

Q-16-0268535

16

33793393

2.33

5.02

3.14

6.48

3.03

6.87

BSR [45]

HeN08-35

BARC-014467-01559

16

3962328

3.58

7.48

3.37

6.93

3.17

7.00

New

HeN08-35

BARC-013645-01207

20

46624541

3.34

6.84

3.72

7.46

3.21

6.95

New

PNJ1

BARC-014527-01571

6

644565

3.45

7.28

3.44

7.17

3.44

7.65

SCN [46]

PNJ1

Map-3031

16

15093996

3.04

5.02

3.35

5.54

3.01

5.18

PRR [47, 48]

Pmg

Map-1995

11

7904934

2.84

4.72

3.61

6.16

3.45

6.19

SSR [49]

Pmg

BARC-042413-08254

16

35175092

4.64

9.90

3.97

8.45

3.68

8.33

RpsUN2 [50]

Pm28

Q-03-0059953

3

5147782

2.06

3.36

3.19

5.54

3.08

5.69

Rps1 [51]

Pm28

BARC-039153-07459

15

831324

5.00

10.67

4.79

10.14

3.68

8.60

PRR [52]

Pm31

Map-0715

4

46749591

1.09

2.35

3.64

7.42

3.09

6.86

New

Pm31

Map-1630

9

3157784

4.37

9.09

3.41

6.98

3.08

6.84

New

  1. aThe SNP co-located in one of the loci intervals as reported previously