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Table 7 Candidate genes related to P. sojae resistance

From: Phenotypic evaluation and genetic dissection of resistance to Phytophthora sojae in the Chinese soybean mini core collection

SNP marker

Nucleotide

Location

Gene

Annotationa

Q-15-0369188

A/G

Exon

Glyma15g41680

LEM3 (ligand-effect modulator 3) family/CDC50-related

Q-03-0266907

A/G

Exon

Glyma03g28660

ARF-related/ADP-ribosylation factor

Q-15-0128012

A/G

Exon

Glyma15g18620

unknown

Q-16-0268535

A/T

Exon

Glyma16g30140

Predicted lipase class 3 gene

BARC-014467-01559

G/T

Exon

Glyma16g04700

Thioredoxin

BARC-013645-01207

A/G

Exon

Glyma20g39240

DEAD/DEAH box helicase

BARC-014527-01571

C/T

Intron

Glyma06g01080

2OG-Fe (II) oxygenase superfamily

Map-3031

A/G

Intron

Glyma16g14080

Serine/threonine protein kinase

Map-1995

A/G

Exon

Glyma11g11100

Phototropic-responsive NPH3 family protein

BARC-042413-08254

A/G

Exon

Glyma16g31930

Zinc finger domain

Q-03-0059953

A/G

Exon

Glyma03g04960

Lipid transport protein

BARC-039153-07459

A/C

Intron

Glyma15g01370

unknown

Map-0715

A/T

Exon

Glyma04g40800

Serine/threonine protein kinase

Map-1630

C/G

Exon

Glyma09g04310

Ankyrin repeat and calmodulin-binding motif

  1. aAnnotation description provided by the Soybean Genome Project, DoE Joint Genome Institute (http://www.soybase.org/)