TY - JOUR AU - Sladek, R. AU - Rocheleau, G. AU - Rung, J. AU - Dina, C. AU - Shen, L. AU - Serre, D. PY - 2007 DA - 2007// TI - A genomewide association study identifies novel risk loci for type 2 diabetes JO - Nature VL - 445 UR - https://doi.org/10.1038/nature05616 DO - 10.1038/nature05616 ID - Sladek2007 ER - TY - JOUR PY - 2007 DA - 2007// TI - Genome-wide association study of 14 000 cases of seven common diseases and 3000 shared controls JO - Nature VL - 447 UR - https://doi.org/10.1038/nature05911 DO - 10.1038/nature05911 ID - ref2 ER - TY - JOUR PY - 2007 DA - 2007// TI - A second generation human haplotype map of over 3.1 million SNPs JO - Nature VL - 449 UR - https://doi.org/10.1038/nature06258 DO - 10.1038/nature06258 ID - ref3 ER - TY - JOUR AU - Reich, D. E. PY - 2003 DA - 2003// TI - Quality and completeness of SNP databases JO - Nat Genet VL - 33 UR - https://doi.org/10.1038/ng1133 DO - 10.1038/ng1133 ID - Reich2003 ER - TY - JOUR AU - Ritchie, M. E. AU - Liu, R. J. AU - Benilton, S. AU - Carvalho, B. S. PY - 2011 DA - 2011// TI - Comparing genotyping algorithms for Illumina’s Infinium whole-genome SNP BeadChips JO - BMC Bioinforma VL - 12 UR - https://doi.org/10.1186/1471-2105-12-68 DO - 10.1186/1471-2105-12-68 ID - Ritchie2011 ER - TY - JOUR AU - Browning, B. L. AU - Yu, Z. PY - 2009 DA - 2009// TI - Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies JO - Am J Hum Genet VL - 85 UR - https://doi.org/10.1016/j.ajhg.2009.11.004 DO - 10.1016/j.ajhg.2009.11.004 ID - Browning2009 ER - TY - JOUR AU - Carvalho, B. AU - Bengtsson, H. AU - Speed, T. P. AU - Irizarry, R. A. PY - 2007 DA - 2007// TI - Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data JO - Biostatistics VL - 8 UR - https://doi.org/10.1093/biostatistics/kxl042 DO - 10.1093/biostatistics/kxl042 ID - Carvalho2007 ER - TY - JOUR AU - Ritchie, M. E. AU - Carvalho, B. S. AU - Hetrick, K. N. AU - Tavare, S. AU - Irizarry, R. A. PY - 2009 DA - 2009// TI - R/Bioconductor software for Illumina’s Infinium whole-genome genotyping BeadChips JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp470 DO - 10.1093/bioinformatics/btp470 ID - Ritchie2009 ER - TY - STD TI - Illumina Inc. Illumina GenCall Data Analysis Software. TECHNOLOGY SPOTLIGHT. 2005. http://www.illumina.com/Documents/products/technotes/technote_gencall_data_analysis_software.pdf. UR - http://www.illumina.com/Documents/products/technotes/technote_gencall_data_analysis_software.pdf ID - ref9 ER - TY - JOUR AU - Giannoulatou, E. AU - Yau, C. AU - Colella, S. AU - Ragoussis, J. AU - Holmes, C. C. PY - 2008 DA - 2008// TI - GenoSNP: a variational Bayes within-sample SNP genotyping algorithm that does not require a reference population JO - Bioinformatics VL - 24 UR - https://doi.org/10.1093/bioinformatics/btn386 DO - 10.1093/bioinformatics/btn386 ID - Giannoulatou2008 ER - TY - JOUR AU - Teo, Y. PY - 2007 DA - 2007// TI - A genotype calling algorithm for the Illumina BeadArray platform JO - Bioinformatics VL - 23 UR - https://doi.org/10.1093/bioinformatics/btm443 DO - 10.1093/bioinformatics/btm443 ID - Teo2007 ER - TY - JOUR AU - Steemers, F. J. PY - 2006 DA - 2006// TI - Whole-genome genotyping with the single-base extension assay JO - Nat Methods VL - 3 UR - https://doi.org/10.1038/nmeth842 DO - 10.1038/nmeth842 ID - Steemers2006 ER - TY - BOOK AU - Everitt, B. S. AU - Hand, D. J. PY - 1981 DA - 1981// TI - Finite mixture distributions PB - Hall/CRC CY - London UR - https://doi.org/10.1007/978-94-009-5897-5 DO - 10.1007/978-94-009-5897-5 ID - Everitt1981 ER - TY - BOOK AU - Lindsay, B. G. PY - 1995 DA - 1995// TI - Mixture Models: Theory, Geometry, and Applications PB - Institute of Mathematical Statistics CY - Hayward ID - Lindsay1995 ER - TY - BOOK AU - Press, W. H. AU - Teukolsky, S. A. AU - Vetterling, W. T. AU - Flannery, B. P. PY - 2007 DA - 2007// TI - ”Section 16.1. Gaussian Mixture Models and k-Means Clustering”. Numerical Recipes: The Art of Scientific Computing PB - Cambridge University Press CY - New York ID - Press2007 ER - TY - JOUR AU - Ferguson, T. S. PY - 1973 DA - 1973// TI - A Bayesian analysis of some nonparametric problem JO - Ann Stat VL - 1 UR - https://doi.org/10.1214/aos/1176342360 DO - 10.1214/aos/1176342360 ID - Ferguson1973 ER - TY - JOUR AU - Antoniak, C. E. PY - 1974 DA - 1974// TI - Mixtures of Dirichlet processes with applications to Bayesian nonparametric problems JO - Ann Stat VL - 2 UR - https://doi.org/10.1214/aos/1176342871 DO - 10.1214/aos/1176342871 ID - Antoniak1974 ER - TY - JOUR AU - Sethuraman, J. PY - 1994 DA - 1994// TI - A constructive definition of Dirichlet priors JO - Stat Sin VL - 4 ID - Sethuraman1994 ER - TY - JOUR AU - Kim, S. AU - Smyth, P. AU - Stern, H. PY - 2010 DA - 2010// TI - A Bayesian mixture approach to modeling spatial activation patterns in multisite fMRI data JO - IEEE Trans Med Imaging VL - 29 UR - https://doi.org/10.1109/TMI.2010.2044045 DO - 10.1109/TMI.2010.2044045 ID - Kim2010 ER - TY - JOUR AU - Teh, Y. W. AU - Jordan, M. I. AU - Beal, M. J. AU - Blei, D. M. PY - 2005 DA - 2005// TI - Sharing Clusters among Related Groups: Hierarchical Dirichlet Processes JO - Advances in Neural Information Processing Systems VL - 17 ID - Teh2005 ER - TY - JOUR AU - Teh, Y. W. AU - Jordan, M. I. AU - Beal, M. J. AU - Blei, D. M. PY - 2006 DA - 2006// TI - Hierarchical Dirichlet Processes JO - J Am Stat Assoc VL - 101 UR - https://doi.org/10.1198/016214506000000302 DO - 10.1198/016214506000000302 ID - Teh2006 ER - TY - JOUR AU - Li, G. X. AU - Gelernter, J. AU - Kranzler, H. R. AU - Zhao, H. Y. PY - 2012 DA - 2012// TI - M3: an improved SNP calling algorithm for Illumina BeadArray data JO - Bioinformatics VL - 28 UR - https://doi.org/10.1093/bioinformatics/btr673 DO - 10.1093/bioinformatics/btr673 ID - Li2012 ER - TY - BOOK AU - McLachlan, G. J. AU - Peel, D. PY - 2000 DA - 2000// TI - Finite Mixture Models PB - Wiley Series in Probability and Statistics CY - New York UR - https://doi.org/10.1002/0471721182 DO - 10.1002/0471721182 ID - McLachlan2000 ER - TY - STD TI - Teh YW. Dirichlet Process. Technical Report: University College London. ID - ref24 ER -