QTL underlying some agronomic traits in barley detected by SNP markers

Wang, Jibin; Sun, Genlou; Ren, Xifeng; Li, Chengdao; Liu, Lipan; Wang, Qifei; Du, Binbin; Sun, Dongfa

doi:10.1186/s12863-016-0409-y

BMC Genomic Data

Table 1 The Statistics of 122 DH lines and their parents for ten agronomic traits in five years

From: QTL underlying some agronomic traits in barley detected by SNP markers

Traits	Year	Huadamai6	Huaai11	ST	DH lines
		Mean	mean		max	M in	Mean	Skewness	Kurtosis	CV(%)
SP	2009	12.75 ± 1.07	8.59 ± 0.67	0.003^b	15.25	4.42	8.34 ± 0.16	0.32	0.92	21.69
	2010	10.67 ± 0.65	8.67 ± 0.31	0.014^a	13.75	4.92	8.85 ± 0.16	0.78	0.04	20.46
	2011	6.50 ± 0.28	4.60 ± 0.88	0.007^b	11.00	4.00	6.74 ± 0.15	0.50	−0.35	24.15
	2012	14.50 ± 1.38	9.27 ± 0.71	0.005^b	21.06	6.83	12.82 ± 0.25	0.22	0.06	21.4
	2013	10.45 ± 0.68	9.82 ± 0.82	0.049^a	13.72	5.50	9.83 ± 0.14	0.10	−0.40	16.06
MSL	2009	8.75 ± 0.33	4.34 ± 0.13	0.000^b	9.91	3.44	5.93 ± 0.15	0.55	−0.58	27.46
	2010	11.25 ± 0.22	5.52 ± 0.10	0.000^b	11.39	4.33	7.27 ± 0.16	0.31	−0.97	24.88
	2011	9.75 ± 0.46	5.12 ± 0.16	0.000^b	11.20	3.78	6.53 ± 0.16	0.50	−0.69	27
	2012	10.39 ± 0.15	4.82 ± 0.14	0.000^b	11.08	3.77	6.75 ± 0.17	0.46	−0.79	27.06
	2013	10.83 ± 0.21	4.88 ± 0.18	0.000^b	12.25	4.17	6.87 ± 0.16	0.56	−0.54	26.01
SMS	2009	31.33 ± 1.14	50.50 ± 1.56	0.000^b	80.50	18.00	50.67 ± 1.61	−0.54	−1.17	35.17
	2010	36.83 ± 0.83	63.00 ± 1.17	0.000^b	91.00	21.00	59.88 ± 1.89	−0.70	−1.10	34.78
	2011	33.5 ± 0.50	57.00 ± 1.73	0.000^b	93.00	16.00	53.42 ± 1.78	−0.35	−1.04	36.77
	2012	34.00 ± 0.84	56.40 ± 1.33	0.000^b	95.00	19.01	55.41 ± 1.82	−0.51	−1.09	36.29
	2013	36.33 ± 0.41	58.00 ± 2.26	0.000^b	91.00	23.00	57.68 ± 1.77	−0.62	−1.04	33.84
SLP	2009	365.50 ± 39.88	528.00 ± 38.05	0.026^a	623.50	136.83	369.95 ± 12.28	0.02	−0.83	36.67
	2010	376.50 ± 18.84	520.00 ± 15.73	0.000^b	765.50	150.50	481.36 ± 12.98	−0.32	−0.82	29.78
	2011	618.00 ± 39.87	219.00 ± 34.85	0.000^b	643.50	83.50	325.93 ± 13.10	0.36	−0.71	44.4
	2012	551.75 ± 52.90	477.00 ± 25.94	0.024^a	1244.00	180.39	670.79 ± 23.96	0.06	−0.97	39.46
	2013	374.17 ± 22.14	484.00 ± 29.78	0.007^b	1009.50	184.83	545.22 ± 19.5	0.04	−0.91	39.49
GP	2009	288.50 ± 32.63	323.17 ± 28.46	0.024^a	362.58	44.58	184.85 ± 6.32	0.44	−0.25	37.75
	2010	329.83 ± 20.48	375.50 ± 38.03	0.305	558.17	121.75	365.64 ± 9.48	−0.59	0.02	28.62
	2011	169.37 ± 11.63	160.25 ± 19.57	0.005^b	523.00	78.00	257.32 ± 10.02	0.43	−0.59	43.01
	2012	415.40 ± 45.97	314.36 ± 31.78	0.065	956.50	128.42	431.47 ± 15.91	0.58	0.06	40.57
	2013	304.25 ± 12.44	371.25 ± 42.23	0.179	695.00	158.22	404.37 ± 11.61	−0.08	−0.74	31.71
GS	2009	22.17 ± 0.92	34.69 ± 3.37	0.003^b	40.20	8.51	22.11 ± 0.68	0.50	−0.48	33.81
	2010	30.98 ± 0.50	43.03 ± 3.98	0.012^a	66.13	16.34	43.69 ± 1.32	−0.56	−0.92	33.49
	2011	27.34 ± 0.83	38.16 ± 4.69	0.045^a	77.00	13.15	38.56 ± 1.30	−0.02	−0.80	37.2
	2012	27.13 ± 1.31	32.21 ± 0.67	0.004^b	71.74	12.09	33.83 ± 1.09	0.11	−0.53	35.47
	2013	28.32 ± 2.99	37.85 ± 2.13	0.004^b	70.18	15.81	42.47 ± 1.21	−0.48	−0.99	31.36
GWP	2009	10.75 ± 1.34	4.29 ± 0.07	0.000^b	10.17	1.00	4.94 ± 0.18	0.21	−0.30	39.34
	2010	17.23 ± 1.19	12.17 ± 0.65	0.000^b	20.84	5.86	12.85 ± 0.29	−0.04	−0.66	25.08
	2011	6.49 ± 0.95	4.19 ± 0.54	0.001^b	17.20	2.69	7.62 ± 0.27	0.94	0.76	39.85
	2012	12.99 ± 016	6.17 ± 0.63	0.002^b	23.71	3.87	11.48 ± 0.38	0.61	0.17	36.02
	2013	17.03 ± 0.85	11.86 ± 1.36	0.000^b	25.13	6.23	12.82 ± 0.33	0.52	0.41	28.21
GWS	2009	0.82 ± 0.05	0.47 ± 0.05	0.000^b	0.97	0.19	0.58 ± 0.02	0.10	−0.62	31.03
	2010	1.61 ± 0.04	1.41 ± 0.07	0.018^a	2.91	0.62	1.50 ± 0.04	0.30	−0.12	29.33
	2011	1.20 ± 0.09	0.99 ± 0.14	0.036^a	2.06	0.41	1.12 ± 0.04	0.55	0.55	31.86
	2012	0.83 ± 0.06	0.67 ± 0.05	0.048^a	1.47	0.35	0.89 ± 0.02	0.17	−0.86	29.21
	2013	1.58 ± 0.16	1.23 ± 0.04	0.016^a	2.15	0.72	1.34 ± 0.03	0.22	−0.60	26.12
TGW	2009	36.69 ± 1.19	23.46 ± 0.81	0.003^b	48.62	15.48	27.65 ± 0.60	0.93	0.55	24.16
	2010	52.05 ± 0.93	29.44 ± 0.72	0.000^b	57.94	21.28	36.44 ± 0.82	0.55	−0.50	24.78
	2011	37.75 ± 4.40	26.14 ± 0.49	0.036^a	57.06	15.87	31.63 ± 0.87	0.80	−0.21	30.4
	2012	30.18 ± 1.19	20.59 ± 1.40	0.000^b	56.30	16.32	28.63 ± 0.78	0.98	0.41	30.19
	2013	55.94 ± 1.11	32.47 ± 0.68	0.000^b	59.92	16.87	33.72 ± 0.95	0.66	−0.49	30.95
SPD	2009	3.59 ± 0.09	3.85 ± 0.08	0.049^a	5.98	2.55	3.83 ± 0.08	0.53	−0.53	22.23
	2010	3.28 ± 0.71	3.81 ± 0.05	0.005^b	6.29	2.50	3.68 ± 0.08	0.71	0.11	23.17
	2011	3.30 ± 0.09	3.70 ± 0.02	0.000^a	5.88	2.36	3.64 ± 0.07	0.63	−0.10	22.44
	2012	3.24 ± 0.06	3.85 ± 0.10	0.000^b	6.10	1.80	3.67 ± 0.08	0.62	−0.02	24.03
	2013	3.36 ± 0.06	3.98 ± 0.11	0.002^b	7.35	2.32	3.74 ± 0.08	0.98	0.77	24.43

^aSignificant at the 5 % level, ^bSignificant at the 1 % level, respectively
ST Significance level, CV Coefficient of variation

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