Table 1 Characteristics of SnRK2 in Gossypium hirsutum
Gene Name | Chromosomes | Start | End | Gene Length | Gene ID | Number of amino acids | Mol.mass (Da) | pI | CDS(bp) | Grand average of hydropathicity (GRAVY) |
|---|---|---|---|---|---|---|---|---|---|---|
GhSnRK2.1 | A01 | 447,830 | 450,835 | 3005 | Gh_A01G0057 | 360 | 40,975.4 | 4.86 | 1083 | −0.347 |
GhSnRK2.2 | A02 | 16,299,920 | 16,301,838 | 1918 | Gh_A02G0789 | 332 | 37,602.1 | 5.73 | 999 | −0.194 |
GhSnRK2.3 | A03 | 98,135,397 | 98,138,978 | 3581 | Gh_A03G1684 | 363 | 41,269.7 | 4.80 | 1092 | −0.347 |
GhSnRK2.4 | A05 | 20,148,675 | 20,150,866 | 2191 | Gh_A05G1922 | 339 | 38,495.8 | 5.53 | 1020 | −0.382 |
GhSnRK2.5 | A10 | 73,521,474 | 73,525,386 | 3912 | Gh_A10G1380 | 357 | 40,937.4 | 5.79 | 1074 | −0.492 |
GhSnRK2.6 | A11 | 4,550,580 | 4,552,694 | 2114 | Gh_A11G0474 | 341 | 38,756.1 | 5.07 | 1026 | −0.325 |
GhSnRK2.7 | A11 | 29,069,141 | 29,071,943 | 2802 | Gh_A11G1757 | 361 | 40,906.5 | 4.98 | 1086 | −0.257 |
GhSnRK2.8 | A11 | 45,306,099 | 45,308,154 | 2055 | Gh_A11G1858 | 341 | 38,616.1 | 5.57 | 1026 | −0.362 |
GhSnRK2.9 | scaffold2734_A11 | 24,966 | 27,913 | 2947 | Gh_A11G3023 | 360 | 41,040.6 | 4.79 | 1083 | −0.330 |
GhSnRK2.10 | A12 | 18,241,166 | 18,244,267 | 3101 | Gh_A12G0641 | 361 | 40,741.2 | 4.77 | 1086 | −0.251 |
GhSnRK2.11 | D01 | 395,483 | 398,406 | 2923 | Gh_D01G0057 | 360 | 41,008.5 | 4.83 | 1083 | −0.352 |
GhSnRK2.12 | D02 | 14,597,151 | 14,599,078 | 1927 | Gh_D02G0839 | 337 | 38,171.7 | 5.52 | 1014 | −0.218 |
GhSnRK2.13 | D02 | 65,195,858 | 65,199,438 | 3580 | Gh_D02G2104 | 363 | 41,269.7 | 4.84 | 1092 | −0.348 |
GhSnRK2.14 | D05 | 20,185,702 | 20,187,904 | 2202 | Gh_D05G2155 | 339 | 38,422.7 | 5.37 | 1020 | −0.344 |
GhSnRK2.15 | D10 | 17,134,725 | 17,138,661 | 3936 | Gh_D10G1083 | 356 | 40,808.3 | 5.89 | 1071 | −0.483 |
GhSnRK2.16 | D11 | 4,160,991 | 4,163,929 | 2938 | Gh_D11G0489 | 360 | 40,868.4 | 4.85 | 1083 | −0.311 |
GhSnRK2.17 | D11 | 4,806,770 | 4,808,880 | 2110 | Gh_D11G0552 | 341 | 38,749.1 | 5.26 | 1026 | −0.356 |
GhSnRK2.18 | D11 | 32,580,911 | 32,582,968 | 2057 | Gh_D11G2149 | 341 | 38,682.1 | 5.47 | 1026 | −0.369 |
GhSnRK2.19 | scaffold4551_D11 | 2394 | 5223 | 2829 | Gh_D11G3472 | 361 | 40,892.5 | 4.98 | 1086 | −0.257 |
GhSnRK2.20 | D12 | 28,126,914 | 28,129,959 | 3045 | Gh_D12G0859 | 361 | 40,798.3 | 4.82 | 1086 | −0.269 |