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Table 2 The cis-element analysis of GhSnRK2 promoters

From: Genome-wide identification and characterization of SnRK2 gene family in cotton (Gossypium hirsutum L.)

Gene

a

b

c

d

e

f

g

GhSnRK2.1

1

0

0

1

3

1

0

GhSnRK2.2

1

1

1

1

0

0

0

GhSnRK2.3

1

1

1

1

7

0

2

GhSnRK2.4

1

1

3

2

2

2

1

GhSnRK2.5

1

0

0

1

1

0

0

GhSnRK2.6

2

0

1

1

3

0

2

GhSnRK2.7

0

0

1

4

3

1

2

GhSnRK2.8

1

0

2

2

2

4

1

GhSnRK2.9

1

0

1

0

2

2

0

GhSnRK2.10

1

0

1

2

0

0

1

GhSnRK2.11

1

0

0

0

2

2

0

GhSnRK2.12

2

1

2

2

0

2

1

GhSnRK2.13

1

0

0

2

8

0

0

GhSnRK2.14

1

1

3

2

0

0

3

GhSnRK2.15

1

0

1

1

1

4

1

GhSnRK2.16

1

0

1

0

2

2

1

GhSnRK2.17

2

0

1

1

2

2

1

GhSnRK2.18

1

0

3

2

1

2

2

GhSnRK2.19

0

1

0

0

1

0

3

GhSnRK2.20

1

0

0

1

0

0

1

  1. Numbers 1, 2, 3… represent the number of repeats of each cis-element whereas 0 indicates absence of the particular cis-element. Letters a, b, c… represent cis-elements. a: ABRE(CACGTG); b: LTR(CCGAAA); c: TC-rich repeats (ATTTTCTTCA); d: TCA-element(GAGAAGAATA); e: HSE(AAAAAATTTC); f: TGACG-motif(TGACG); g: MBS(CAACTG)
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BMC Genomic Data

ISSN: 2730-6844

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