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Table 2 Major statistics for three parentage panels (French, New Zealand, North America) on the 30 French populations: MAF, PI (Probability of identity), PE1 and PE2 (exclusion probabilities considering the exclusion of one or the two parents respectively)

From: Development of a SNP panel dedicated to parentage assignment in French sheep populations

French panel (249 SNPs)

New Zealander panel (98 SNPs)

North American panel (163 SNPs)

 

MAF

PI

1-PE1

1-PE2

MAF

PI

1-PE1

1-PE2

MAF

PI

1-PE1

1-PE2

OIF

0.381

7.90E-96

7.24E-13

2.63E-34

0.310

1.00E-30

3.56E-04

2.26E-11

0.337

1.11E-52

5.70E-07

2.97E-19

CHL

0.387

9.95E-97

4.78E-13

1.68E-34

0.339

2.15E-32

1.65E-04

6.10E-12

0.345

4.44E-53

4.40E-07

1.94E-19

RAVA

0.398

6.71E-98

1.98E-13

6.33E-35

0.351

2.05E-32

1.21E-04

4.06E-12

0.367

1.34E-53

1.94E-07

8.77E-20

CHM

0.367

1.95E-94

1.81E-12

6.85E-34

0.303

6.79E-30

4.62E-04

3.33E-11

0.319

1.90E-51

1.33E-06

1.12E-18

BCF

0.360

6.67E-93

3.44E-12

1.83E-33

0.264

1.41E-26

1.32E-03

5.73E-10

0.300

2.65E-47

3.44E-06

2.40E-17

LIM

0.384

2.48E-95

5.97E-13

2.03E-34

0.331

1.47E-31

2.28E-04

1.29E-11

0.346

4.24E-52

4.70E-07

2.94E-19

TEX

0.388

2.76E-96

4.36E-13

1.55E-34

0.321

1.37E-31

2.83E-04

1.60E-11

0.339

3.56E-53

5.94E-07

3.64E-19

SUF

0.375

2.87E-95

9.05E-13

2.82E-34

0.322

9.01E-32

2.54E-04

1.00E-11

0.333

7.16E-53

6.84E-07

5.19E-19

MERA

0.408

3.39E-98

1.15E-13

3.76E-35

0.344

8.23E-33

1.28E-04

3.82E-12

0.372

1.75E-55

1.16E-07

3.82E-20

PAS

0.408

7.65E-97

1.15E-13

3.81E-35

0.354

4.13E-33

9.45E-05

2.58E-12

0.388

3.25E-56

6.33E-08

2.05E-20

NDV

0.394

8.50E-99

2.43E-13

7.14E-35

0.352

8.56E-33

1.12E-04

3.56E-12

0.368

6.28E-56

1.53E-07

4.79E-20

BMC

0.405

6.33E-100

1.26E-13

3.98E-35

0.363

1.86E-33

8.52E-05

2.69E-12

0.394

6.32E-58

4.74E-08

1.50E-20

CDL

0.383

1.83E-94

6.05E-13

2.21E-34

0.326

5.55E-31

2.37E-04

1.35E-11

0.336

3.28E-52

6.25E-07

3.22E-19

BB

0.376

1.56E-95

8.53E-13

2.52E-34

0.318

1.92E-30

2.93E-04

1.73E-11

0.344

3.48E-52

4.45E-07

2.26E-19

ROMV

0.373

1.02E-93

1.42E-12

5.66E-34

0.309

2.44E-30

3.92E-04

1.62E-11

0.319

5.15E-51

1.46E-06

1.17E-18

GRI

0.379

3.91E-92

7.89E-13

2.75E-34

0.345

1.16E-31

1.46E-04

6.46E-12

0.356

1.80E-52

2.95E-07

1.69E-19

VDN

0.371

1.14E-94

1.30E-12

4.73E-34

0.322

7.05E-32

2.59E-04

1.30E-11

0.322

2.80E-51

1.25E-06

1.20E-18

RO

0.390

2.97E-98

3.53E-13

1.19E-34

0.323

6.54E-31

2.76E-04

1.38E-11

0.345

5.46E-53

4.36E-07

4.82E-19

TAR

0.388

3.72E-97

3.45E-13

1.00E-34

0.333

5.88E-32

1.96E-04

6.86E-12

0.369

2.03E-55

1.28E-07

3.97E-20

COR

0.401

5.39E-98

1.61E-13

5.14E-35

0.356

2.44E-32

1.16E-04

4.77E-12

0.359

5.43E-55

2.04E-07

7.24E-20

MOUR

0.408

4.67E-99

1.02E-13

3.25E-35

0.352

3.13E-33

1.12E-04

3.62E-12

0.377

1.69E-56

1.06E-07

3.43E-20

MTN

0.382

2.77E-96

5.48E-13

1.59E-34

0.323

4.61E-31

2.72E-04

1.71E-11

0.340

4.20E-53

6.34E-07

4.38E-19

MTR

0.389

3.97E-98

3.56E-13

1.19E-34

0.323

1.74E-31

2.32E-04

9.91E-12

0.342

1.63E-53

4.66E-07

1.88E-19

ROUS

0.374

1.53E-95

1.15E-12

4.53E-34

0.304

4.74E-30

4.57E-04

4.86E-11

0.340

3.10E-52

5.82E-07

5.32E-19

ROME

0.406

1.27E-98

1.13E-13

3.72E-35

0.323

1.32E-30

2.41E-04

1.26E-11

0.365

1.45E-53

1.69E-07

7.83E-20

MBB

0.370

1.21E-93

1.40E-12

5.33E-34

0.312

1.13E-30

3.49E-04

1.81E-11

0.336

1.81E-51

6.46E-07

4.42E-19

LAC-CONF

0.399

3.02E-96

2.00E-13

6.28E-35

0.349

3.02E-32

1.17E-04

5.58E-12

0.361

1.07E-54

1.89E-07

7.45E-20

LAC-OL

0.392

1.05E-94

2.95E-13

9.16E-35

0.332

6.06E-31

2.20E-04

1.16E-11

0.364

2.44E-53

2.05E-07

1.05E-19

LAC-GID

0.385

3.82E-95

5.46E-13

1.76E-34

0.329

3.48E-31

2.08E-04

8.85E-12

0.353

1.06E-52

3.22E-07

1.28E-19

LAC-OM

0.400

1.76E-97

1.85E-13

5.89E-35

0.370

6.05E-33

7.62E-05

2.67E-12

0.385

1.65E-55

7.40E-08

2.46E-20