Item | Breed group | |||||||
---|---|---|---|---|---|---|---|---|
Rom | Coop | Peren | Tex | CompRCP | CompRCPT | Comprcp2 | ||
Relationship coefficient between animals | Rom | 0.000 | ||||||
Coop | 0.000 | 0.011 | ||||||
Peren | 0.000 | 0.000 | −0.001 | |||||
Tex | 0.000 | 0.000 | 0.000 | 0.008 | ||||
CompRCP | 0.000 | 0.009 | 0.000 | 0.001 | 0.015 | |||
CompRCPT | 0.000 | 0.007 | 0.000 | 0.003 | 0.011 | 0.018 | ||
Comprcp2 | 0.001 | 0.003 | 0.000 | 0.002 | 0.007 | 0.006 | 0.063 | |
Inbreeding | _ | 0.030 | 0.020 | 0.002 | 0.007 | 0.010 | −0.007 | 0.092 |
Heterozygosity | _ | 0.358 | 0.351 | 0.376 | 0.354 | 0.381 | 0.377 | 0.370 |
MAF in % of SNP per categories | MAF ≤ 0.01 | 1.9 | 1.8 | 1.3 | 1.9 | 0.9 | 1.1 | 0.6 |
0.01 < MAF ≤ 0.05 | 5.2 | 4.7 | 4.1 | 5.8 | 3.7 | 3.6 | 2.5 | |
0.05 < MAF ≤ 0.1 | 7.1 | 7.1 | 6.3 | 7.6 | 6.0 | 6.1 | 5.4 | |
0.1 < MAF ≤ 0.2 | 17.5 | 17.4 | 17.3 | 17.6 | 17.0 | 16.8 | 16.7 | |
0.2 < MAF ≤ 0.3 | 20.9 | 20.9 | 21.6 | 20.7 | 21.5 | 22.0 | 22.1 | |
0.3 < MAF ≤ 0.4 | 22.9 | 23.4 | 23.9 | 22.8 | 24.7 | 24.4 | 25.7 | |
0.4 < MAF ≤ 0.5 | 24.6 | 24.7 | 25.5 | 23.5 | 26.3 | 26.0 | 26.9 |