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BMC Genetics

Open Access

Correction to: Novel SNP markers in InvGE and SssI genes are associated with natural variation of sugar contents and frying color in Solanum tuberosum Group Phureja

  • D. Duarte-Delgado1, 2,
  • D. Juyó1,
  • C. Gebhardt3,
  • F. Sarmiento4 and
  • T. Mosquera-Vásquez5Email author
BMC GeneticsBMC series – open, inclusive and trusted201718:91

https://doi.org/10.1186/s12863-017-0555-x

Received: 26 September 2017

Accepted: 4 October 2017

Published: 20 October 2017

The original article was published in BMC Genetics 2017 18:23

Correction

After the publication of this work [1], we detected some mistakes in the reverse primers of InvGE and BMY-8/2 and in the forward primer of PWD shown in Table 1. Additionally, we made some editions in the primer sequences from Additional files 2 and 3. Please see the corrected Table 1 and Additional files 2 and 3 below.
Table 1

Loci (PGSC0003DMG*********) from the reference genome [28, 43] analyzed in 112 Solanum tuberosum Group Phureja accessions

Gene Acronym

Locus

Chr.

Primer Sequences 5′-3’

Ta (°C)

Amplicon

No. SNPs Scored

(GenBank Accesion No.)

size (bp)

(Scored previously)e

Stp23 (PHO1)a

(D00520)

PGSC0003DMG400007782

III

*f-cagatatgttacatactctacc

r-tcattagtcacaactttatcgg

59

963

4 (0)

StpL (PHO1)a

(X73684)

PGSC0003DMG400028382

V

*f-ttacattgcacaagcacaagc

r-gtgtacatacaatactctatcc

57

982

14 (1) [67]

SssI (Y10416)

PGSC0003DMG402018552

III

f-aacaataggaatttaccataacc

*r-atattcccaaacaaaacagagc

57

970

12 (0)

InvGE (INV-cw)a

(AJ133765)

PGSC0003DMG400008943

IX

f-caattcttcgattcttcatagg

*r-acagcacctatgtattataatgg

57

798

9 (8) [39]

Pain1 (INV)a

(X70368)

PGSC0003DMG400013856

III

f-catacattacactatagatcc

*r-aattgaagcagatcatgtagg

56

926

5 (2) [39,40]

 

f-caaaatgaatacatattaagaggb

56

707

4 (0)

 

*r-cttaagcagttgcttagagc

   

UGPase (D00667)

PGSC0003DMG401013333

XI

f-atgatgttctccacttaaaagc

56

805

11 (1)[42]

 

*r-tttcagattttcagaagagagg

   
 

*f-tgattaacgatactatacgtcc

56

931

12 (1) [42]

 

r-ttaaaacttccttatactatatgg

   

GWD (Y09533)

PGSC0003DMG400007677

V

f-ttctgttatctacttagttacg

56

992

5 (3) [7,41]

 

*r-gttttatatcttgcttctttgg

   

BMY-8/2 (AF393847)

PGSC0003DMG400001855

VIII

f-gctactggagcatggtgacagac

57

560

9 (9) [5]

 

*r-ttacatagaggtctgtcctgcttgag

   

PWD (AY747068)

PGSC0003DMG400016613

IX

*f-ggtctgatgatctatctgattgcc

57

871

16 (16) [7,41]

 

r-cgacatcttgaggagaaccaaactt

   

LapN (X77015)

PGSC0003DMG400007831

XII

f-gcttcctggtcttggctcd

60

985

8 (3) [37]

 

*r-gataggcatacgcagccaggtcagaaatcaa

   

Chr, chromosome; Ta, annealing temperature

* Primer used for amplicon sequencing

a These parenthesis include the alternative acronyms used in the starch-sugar interconversion pathway scheme adapted by Schreiber et al. [7]

b From a region downstream of the Pain1 candidate gene

c From Schreiber et al. [7]

d From Fischer et al. [37]

e The studies where the SNPs or the related amino acid changes were previously reported in tetraploid potatoes are indicated

Notes

Declarations

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

Authors’ Affiliations

(1)
Faculty of Agricultural Sciences, Agronomy Department, National University of Colombia
(2)
Present address: INRES-Plant Breeding, University of Bonn
(3)
Department of Plant Breeding and Genetics, Max Planck Institute for Plant Breeding Research
(4)
Faculty of Sciences, Biology Department, National University of Colombia
(5)
Faculty of Agricultural Sciences, Agronomy Department, National University of Colombia

Reference

  1. Duarte-Delgado D, Juyó D, Gebhardt C, Sarmiento F, Mosquera-Vásquez T. Novel SNP markers in InvGE and SssI genes are associated with natural variation of sugar contents and frying color in Solanum tuberosum group Phureja. BMC Genomics. 2017;18:23.View ArticleGoogle Scholar

Copyright

© The Author(s). 2017

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