BMC Genomic Data

Table 3 Empirical size (in percentage (%)) of GDTI, MCGDTI, MCGDT-ME, GDT-ME, GDT and MCPDTI^a

From: Generalized disequilibrium test for association in qualitative traits incorporating imprinting effects based on extended pedigrees

Setting	Complete data		Incomplete data
	GDTI		MCGDTI_T	MCGDTI_E	MCGDT-ME_T	MCGDT-ME_E	GDT-ME	GDT	MCPDTI_T	MCPDTI_E
Based on 90 pedigrees
1	0.98		1.04	1.10	0.95	0.99	0.82	0.85	0.80	0.84
2	1.14		1.12	1.14	1.12	1.06	0.82	0.87	0.66	0.74
3	0.99		1.05	0.99	0.91	0.94	0.80	0.87	0.81	0.86
4	0.85		0.97	1.05	0.98	0.91	0.74	0.90	0.91	0.91
5	0.96		1.11	1.11	0.96	0.88	0.87	1.03	0.73	0.81
6	1.11		1.13	1.14	0.84	0.81	0.98	1.05	0.90	0.89
7	1.13		0.85	0.96	0.96	0.88	0.70	0.82	0.94	1.05
8	1.09		1.11	1.13	0.86	0.86	0.72	0.76	0.83	0.86
9	1.11		1.14	1.13	1.05	1.12	0.82	0.89	1.04	1.00
Based on 150 pedigrees
1	1.00		0.93	0.94	0.94	0.93	0.93	0.95	0.90	0.98
2	1.10		1.05	1.04	0.98	0.98	0.98	1.09	0.88	0.93
3	1.05		1.09	1.10	0.97	0.99	1.04	1.04	0.89	0.92
4	0.97		0.95	0.96	0.81	0.83	0.87	0.89	0.99	1.13
5	1.13		1.19	1.17	1.01	0.93	0.90	1.05	0.92	0.93
6	1.15		1.15	1.14	0.98	0.95	0.82	0.83	0.98	1.07
7	1.06		0.98	1.02	1.05	1.04	0.85	0.86	1.02	1.03
8	0.97		0.93	0.93	0.95	0.99	0.76	0.92	0.95	0.96
9	1.07		1.02	1.01	0.86	0.85	0.93	1.09	1.05	1.03

^aThe simulations are conducted under the null hypothesis of no association and no imprinting based on 10,000 replicates for 90 and 150 pedigrees at 1% significance level, respectively

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