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Table 4 Analysis of differentially expressed genes and their DNA methylation levels

From: Comparative Transcriptome and DNA methylation analyses of the molecular mechanisms underlying skin color variations in Crucian carp (Carassius carassius L.)

Gene ID

Red-FPKM

White-FPKM

Log2 (R/W)

Red-RPM

White-RPM

Log2 (R/W)

Tyr

1.09

2.46

−1.16

32.46

8.63

1.91

Mitfa

0.65

2.85

−1.92

31.13

11.38

1.45

Foxd3

10.03

2.257

4.44

0.33

16.87

−5.67

Dct

0.21

2.12

−3.31

9.72

3.53

1.46

Hpda

103.48

37.31

1.47

1.26

23.45

−3.86−4.21