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Table 4 Analysis of differentially expressed genes and their DNA methylation levels

From: Comparative Transcriptome and DNA methylation analyses of the molecular mechanisms underlying skin color variations in Crucian carp (Carassius carassius L.)

Gene ID Red-FPKM White-FPKM Log2 (R/W) Red-RPM White-RPM Log2 (R/W)
Tyr 1.09 2.46 −1.16 32.46 8.63 1.91
Mitfa 0.65 2.85 −1.92 31.13 11.38 1.45
Foxd3 10.03 2.257 4.44 0.33 16.87 −5.67
Dct 0.21 2.12 −3.31 9.72 3.53 1.46
Hpda 103.48 37.31 1.47 1.26 23.45 −3.86−4.21