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Table 11 Comparative analysis between inter-simple sequence repeat and start codon targeted polymorphic markers

From: Assessment of genetic diversity in Vigna unguiculata L. (Walp) accessions using inter-simple sequence repeat (ISSR) and start codon targeted (SCoT) polymorphic markers

Parameters Markers
  ISSR SCoT
No of clusters from dendrogam 5 5
No of clusters from PCA 5 5
Mean major allele frequency 0.3778 0.3148
No. of observations 18 18
Total no of alleles 32 52
Mean no of alleles 9.4000 11.1667
Mean gene diversity 0.7358 0.8158
Mean PIC 0.7192 0.8009
Allele count range 1–15 1–10
Allele frequency range 0.0556–0.8333 0.0556–0.5556
Total No of polymorphic loci 70 80
Range of % polymorphic loci 94.44–100.00 94.44–100.00
Range of effective alleles, Ne 1.2887–1.7831(0.1797–0.2944) 1.7416–1.9181(0.0776–0.2426)
Nei’s genetic diversity, H 0.2112–0.4335(0.0600–0.1371) 0.4111–0.4778(0.0226–0.1168)
Shannon’s information index, I 0.3583–0.6237(0.0639–0.1759) 0.5911–0.6706(0.0233–0.1604)
Total gene diversity, Ht 0.3817–0.4957 0.4686–0.4958
Gene diversity in population Hs 0.2551–0.3482 0.4344–0.46800
Coeff of gene differentiation Gst 0.2049–0.3180 0543–0.0735
Level of gene flow, Nm 1.2497–3.5193 9.3067–419.6100
  1. PIC Polymorphic information content, Standard deviations are in parentheses