Study |
\(\bar {T}\)
|
\(\bar {S}^{2}\)
|
ν
|
---|
HapMap | 0.002 (0.037) | 1.330 (0.096) | 0.992 |
SFS1 | -0.000 (0.037) | 1.321 (0.107) | 0.992 |
SFS2 | -0.001 (0.037) | 1.309 (0.076) | 0.999 |
Sorbs | -0.001 (0.037) | 1.412 (0.144) | 0.999 |
SFS3 | 0.001 (0.043) | 2.015 (0.166) | 0.997 |
- The test statistics \(\bar {T}\) averaged over replicates and SNPs and the average of the empirical variances \(\bar {S}^{2}\) are compared between HapMap, SFS1 (synthetic family study 1), SFS2, Sorbs and SFS3 assuming the null hypothesis and \(R^{2}_{\mathrm {h}}=0.9\). Standard deviations are presented in parentheses. We further provide an estimate of the deflation factor ν for the empirical variance of the effect estimate