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Table 3 Primers used for genotyping F0 offspring with deletions, duplications and inversions

From: Generation of megabase-scale deletions, inversions and duplications involving the Contactin-6 gene in mice by CRISPR/Cas9 technology

Primers

Sequence (5′ - 3′)

Positions on mouse chromosome 6

FWD1.1

TGGGTCCTTGGAGAGGAACA

chr6: 103,842,509-103,842,528

FWD1.2

ACTCTGGTGACAATGTGCGT

chr6: 103,841,824-103,841,843

REV1

TGCACATGACCCATGACCTC

chr6: 103,842,786-103,842,767

FWD2.1

TCCCCATCTGCTGGCTCTAT

chr6: 104,979,678-104,979,697

FWD2.2

AGAGGTTGATGCAAGCTGCC

chr6: 104,979,540-104,979,559

REV2

CCCCCAAGTGATGCTTCTGT

chr6: 104,980,355-104,980,374

FWD-SNP

TTGCCCTGGTTGTCTTTTATTCAT

chr6: 104,847,831-104,847,854

REV-SNP

AGCACAAACCATGTCACCAAG

chr6: 104,848,314-104,848,334