Table 2 Sequence variants associated with three panicle-related traits in two field tests
2013 | 2014 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Site | PL | PB | SB | PL | PB | SB | ||||||
p | r 2 | p | r 2 | p | r 2 | p | r 2 | p | r 2 | p | r 2 | |
APO1 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 11 sites in LDa | – | – | – | – | 0.001 | 0.180 | – | – | – | – | 0.014 | 0.109 |
 948 |  |  |  |  | 0.003 | 0.191 |  |  |  |  | 0.032 | 0.123 |
APO2 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 102, 888b | – | – | – | – | 0.007 | 0.123 | – | – | – | – | 0.012 | 0.112 |
DEP1 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 41 | 0.003 | 0.053 | – | – | – | – | 0.035 | 0.038 | – | – | – | – |
 314c | 0.011 | 0.039 | – | – | – | – | 0.005 | 0.064 | – | – | – | – |
 683, 970c | 0.006 | 0.060 | – | – | – | – | 0.004 | 0.089 | – | – | – | – |
FON1 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 1062 | 0.045 | 0.036 | – | – | – | – | 0.024 | 0.056 | – | – | – | – |
HD1 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 10 sites in LDd | – | – | 0.001 | 0.089 | – | – | – | – | 0.011 | 0.070 | – | – |
 646 | – | – | 0.006 | 0.064 | – | – | – | – | 0.012 | 0.067 | – | – |
 652 | – | – | 0.015 | 0.052 | – | – | – | – | 0.010 | 0.071 | – | – |
 660 | – | – | 0.005 | 0.088 | – | – | – | – | 0.012 | 0.093 | – | – |
 1216 | – | – | 0.005 | 0.068 | 0.001 | 0.185 | – | – | 0.023 | 0.057 | 0.039 | 0.078 |
SP1 | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 922, 983e | – | – | – | – | 0.001 | 0.170 | – | – | – | – | 0.008 | 0.126 |