Table 1 Descriptive statistics of simulation schemes
From: High density marker panels, SNPs prioritizing and accuracy of genomic selection
Historical Population (HP) | |
Number of generation | 315 |
Mutation rate for markers | 10−4 |
Mutation rate for QTL | 10−4 |
Founder Population (G0) | |
Number of generation | 3 |
Number of male | 1500 |
Number of female | 15,000 |
Selection Population (G3) | |
Number of chromosomes | 10 |
Length per chromosome (cM) | 100 |
Number of markers per generation | 200,000/400,000 |
Marker distribution | Evenly spaced |
Number of QTL per generation | 100 |
QTL distribution | Randomly distributed |
QTL effect | Sampled from gamma with shape 0.4 |
Heritability | 0.4 |
Genetic variance | 0.4 |
Residual variance | 0.6 |