BMC Genomic Data

Table 3 Statistics of genetic variation 23 melon populations as measured by 2748 high quality SNP loci, GenAlex software

From: Landraces of snake melon, an ancient Middle Eastern crop, reveal extensive morphological and DNA diversity for potential genetic improvement

Pop	N	P	I	Ho	He	uHe	F
SD30	4	65.8%	0.545	0.408	0.372	0.425	− 0.105
JA07	4	62.6%	0.516	0.394	0.353	0.404	−0.118
NF27	4	697%	0.564	0.433	0.388	0.443	−0.116
JM05	4	60.9%	0.491	0.405	0.333	0.380	−0.215
MZ2	3	46.1%	0.386	0.189	0.265	0.319	0.245
AB59	4	66.2%	0.534	0.322	0.366	0.418	0.083
AZ61	4	64.1%	0.501	0.384	0.340	0.388	−0.137
UA58	4	66.0%	0.548	0.348	0.376	0.430	0.050
TB16	4	71.9%	0.576	0.438	0.398	0.455	−0.098
NS29	4	68.3%	0.550	0.429	0.377	0.431	−0.144
AWG	4	62.7%	0.497	0.407	0.337	0.385	−0.201
NT25	4	67.6%	0.573	0.524	0.395	0.451	−0.322
TK17	4	66.4%	0.521	0.320	0.355	0.406	0.077
TA12	4	70.0%	0.575	0.434	0.396	0.453	−0.105
UA11	4	53.1%	0.454	0.300	0.306	0.350	−0.024
HD51	4	66.9%	0.563	0.416	0.388	0.444	−0.077
RS35	4	70.0%	0.569	0.421	0.391	0.447	−0.081
RA40	4	66.9%	0.564	0.503	0.389	0.445	−0.275
RB37	4	69.3%	0.563	0.429	0.387	0.442	−0.112
HH49	4	65.5%	0.548	0.393	0.375	0.428	−0.062
BB57	4	66.7%	0.568	0.419	0.391	0.447	−0.077
BB56	4	68.0%	0.568	0.376	0.390	0.446	0.022
BT53	4	68.4%	0.555	0.367	0.380	0.435	0.019
Mean	3.720	65.4%	0.495	0.364	0.339	0.389	−0.084
SE	0.008	1.2	0.002	0.003	0.002	0.002	0.005

N number of individuals, P percent polymorphic loci, I Shannon’s Information Index, Ho Observed Heterozygosity, He Expected Heterozygosity, uHe unbiased expected heterozygosity, F fixation index

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ISSN: 2730-6844

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