Table 1 Genomic position (hg19) and significance of DMRs identified to be associated with TGs in pretreatment data
From: Comparison of novel and existing methods for detecting differentially methylated regions
Chromosome | Start | Stop | No. probes | DMR p value | Method |
|---|---|---|---|---|---|
1 | 247802703 | 247803688 | 7 | < 0.01 | Bumphunter |
11 | 68583422 | 68609203 | 15 | 3.25E-14 | GlobalP |
11 | 68607622 | 68607676 | 2 | 1.01E-06 | Comb-p |
11 | 68607675 | 68607737 | 2 | 1.69E-21 | DMRcate |
11 | 68606155 | 68608154 | 3 | 1.30E-15 | GlobalP |
12 | 11803199 | 12038352 | 31 | 2.34E-3 | GlobalP |
20 | 443632 | 443641 | 2 | 3.00E-2 | Bumphunter |
21 | 43620345 | 249212500 | 23 | 2.34E-3 | GlobalP |