Table 3 Third order linkage disequilibrium generated in population Z (\( {\delta}_{TMK}^Z \)) after admixture of populations X and Y with alternative allele frequencies and second order linkage disequilibrium parameters. It assumes τ=0.5 and \( {\delta}_{TMK}^X=0 \), \( {\delta}_{TMK}^Y=0 \)
From: Extent of third-order linkage disequilibrium in a composite line of Iberian pigs
\( {f}_T^X \) | \( {f}_M^X \) | \( {f}_K^X \) | \( {f}_T^Y \) | \( {f}_M^Y \) | \( {f}_K^Y \) | \( {\delta}_{MK}^X \) | \( {\delta}_{TK}^X \) | \( {\delta}_{TM}^X \) | \( {\delta}_{MK}^Y \) | \( {\delta}_{TK}^Y \) | \( {\delta}_{TM}^Y \) | \( {\delta}_{TMK}^Z \) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.8 | 0.8 | 0.8 | 0.2 | 0.2 | 0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
0.8 | 0.2 | 0.8 | 0.2 | 0.8 | 0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0 |
0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0 |
0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.5 | 0.25 | 0 | 0 | 0 | 0 | 0 | 0 |
0.5 | 0.5 | 0.5 | 0.2 | 0.2 | 0.2 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0.056 |
0.5 | 0.5 | 0.5 | 0.2 | 0.2 | 0.2 | 0.25 | 0.25 | 0 | 0 | 0 | 0 | 0.038 |
0.5 | 0.5 | 0.5 | 0.1 | 0.1 | 0.1 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0.075 |
0.5 | 0.5 | 0.5 | 0.01 | 0.01 | 0.01 | 0.25 | 0.25 | 0.25 | 0 | 0 | 0 | 0.092 |