Skip to main content

Table 4 Markers and genes significantly associated with yield in the two environments

From: Genetic characterization of inbred lines from Shaan A and B groups for identifying loci associated with maize grain yield

Environment

Chr

Pos

P-value

Marker R2

MAF

Candidate interval

Gene ID

Yangling

1

64,203,074

2.54E-04

0.182

0.071

64,053,074–64,353,074

Zm00001d029264

Yangling, Yulin

1

9,026,216

4.18E-04

0.149

0.107

8,876,216–9,176,216

Zm00001d027610

Yangling

1

296,366,071

5.48E-04

0.150

0.28

296,216,071–296,516,071

Zm00001d034563

Yangling

1

82,414,042

5.88E-04

0.179

0.071

82,264,042–82,564,042

Zm00001d029679

Yangling

1

275,324,785

7.76E-04

0.216

0.269

275,174,785–275,474,785

Zm00001d033834

Yangling

1

208,984,720

8.68E-04

0.113

0.061

208,834,720–209,134,720

Zm00001d031996

Yangling

2

17,192,443

1.72E-04

0.136

0.084

17,042,443–17,342,443

Zm00001d002623

Yangling

3

174,894,572

1.50E-04

0.174

0.255

174,744,572–175,044,572

Zm00001d042637

Yangling

3

217,771,512

7.76E-04

0.109

0.364

217,621,512–217,921,512

Zm00001d044048

Yangling

3

151,015,584

8.38E-04

0.110

0.054

150,865,319–151,165,584

Zm00001d042108

Yulin

4

226,628,381

8.83E-05

0.286

0.262

226,478,381–226,778,381

Zm00001d053334

Yangling

4

36,611,473

1.77E-04

0.182

0.349

36,461,473–36,761,473

Zm00001d049590

Yulin

4

224,904,708

2.76E-04

0.115

0.09

224,754,708–225,054,708

Zm00001d053298

Yulin

4

227,248,589

5.65E-04

0.133

0.248

227,098,589–227,398,589

Zm00001d053354

Yulin

4

228,002,806

7.35E-04

0.14

0.095

227,812,359–228,152,806

Zm00001d053369

Yulin

4

197,048,390

1.09E-03

0.116

0.232

196,898,390–197,198,390

Zm00001d052678

Yulin

4

222,979,053

1.09E-03

0.117

0.200

222,829,053–223,129,053

Zm00001d053259

Yangling

5

60,500,183

7.64E-04

0.102

0.064

60,350,183–60,650,183

Zm00001d014722

Yangling

6

37,566,120

4.97E-04

0.130

0.257

37,416,120–37,716,120

Zm00001d035629

Yangling

7

6,198,940

7.25E-04

0.140

0.285

5,969,535–6,348,940

Zm00001d018819

Yulin

7

6,119,535

7.34E-04

0.126

0.366

5,969,535–6,348,940

Zm00001d018819

Yangling

7

165,187,310

9.21E-04

0.113

0.087

165,037,310–165,337,310

Zm00001d021877

Yangling

8

166,364,288

2.95E-04

0.154

0.070

166,214,288–166,514,288

Zm00001d012007

Yulin

8

134,765,776

4.07E-04

0.226

0.176

134,615,776–134,915,776

Zm00001d010946

Yangling

8

103,836,414

4.24E-04

0.104

0.096

103,686,414–103,986,414

Zm00001d010201

Yangling

8

153,275,644

5.55E-04

0.129

0.133

153,108,098–153,425,644

Zm00001d011515

Yulin

9

26,330,295

6.05E-05

0.145

0.073

26,180,295–26,480,295

unknown

Yangling

9

95,895,364

2.94E-04

0.251

0.362

95,745,364–96,045,364

Zm00001d046558

Yangling

9

53,338,849

3.34E-04

0.125

0.105

53,188,849–53,488,849

Zm00001d046004

Yangling

9

124,887,914

3.72E-04

0.127

0.056

124,737,914–125,037,914

Zm00001d047266

Yangling

10

126,844,985

5.79E-04

0.121

0.056

126,694,985–126,994,985

Zm00001d025703

Yangling

10

123,993,567

6.10E-04

0.114

0.329

123,843,567–124,143,567

Zm00001d025617

Yulin

10

13,050

8.89E-04

0.100

0.154

0–163,050

unknown