Skip to main content

Table 3 Summary of the top 4 Go Term per contig (Molecular Function Category)

From: A preliminary integrated genetic map distinguishes every chromosome pair and locates essential genes related to abiotic adaptation of Crassostrea angulata/gigas

Contig

Gene onthology term

Go term description

Contig 1

GO:0005515, GO:0000049, GO:0016706, GO:0046872

Protein binding, tRNA binding, oxidoreductase activity, metal ion binding.

Contig 2

GO:0005515, GO:0004553, GO:0005525, GO:0008270

Protein binding, hydrolase activity, GTP binding, zinc ion binding.

Contig 3

GO:0004930, GO:0004983, GO:0005230, GO:0005515

G-protein coupled receptor activity, neuropeptide Y receptor activity, extracellular ligand-gated ion channel activity, protein binding.

Contig 4

GO:0005515, GO:0016787, GO:0016810, GO:0016812

Protein binding, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides.

Contig 5

GO:0005515, GO:0008270, GO:0004175, GO:0004298

Protein binding, zinc ion binding, endopeptidase activity, threonine-type endopeptidase activity.

Contig 6

GO:0004930, GO:0004983, GO:0005230

G-protein coupled receptor activity, neuropeptide Y receptor activity, extracellular ligand-gated ion channel activity.

Contig 7

GO:0005515, GO:0005525, GO:0008270

Protein binding, GTP binding, zinc ion binding.

Contig 8

GO:0005515, GO:0008270, GO:0004175, GO:0004298

Protein binding, zinc ion binding, endopeptidase activity, threonine-type endopeptidase activity.

Contig 9

GO:0000287, GO:0004019, GO:0005525, GO:0046872

Magnesium ion binding, adenylosuccinate synthase activity, GTP binding, metal ion binding.

Contig 10

GO:0005515, GO:0008233, GO:0008237, GO:0008270

Protein binding, peptidase activity, metallopeptidase activity, zinc ion binding.

Contig 11

GO:0051015, GO:0005515, GO:0046872

 

BAC 127F5

GO:0004930, GO:0003677, GO:0008270, GO:0016301

G-protein coupled receptor activity, DNA binding, zinc ion binding, kinase activity.